RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SMTNL2Q2TAL5 461 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 OLFML1Q6UWY5 402 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 ADGRF2Q8IZF7 708 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 NKD2Q969F2 451 aaPredicted RBP24.42■■□□□ 1.5
MSX2-201ENST00000239243 ACSF2Q96CM8 615 aaPredicted RBP24.42■■□□□ 1.5
MSX2-201ENST00000239243 GOLGA2P5Q9HBQ8 144 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 ZNF148Q9UQR1 794 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 DPYSL4O14531 572 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 PTGESO14684 152 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 NDC80O14777 642 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 TRUB2O95900 331 aaKnown RBP24.42■■□□□ 1.5
MSX2-201ENST00000239243 LILRA4P59901 499 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 SKOR1P84550 965 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 SLC6A3Q01959 620 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 PDE4CQ08493 712 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 AGBL2Q5U5Z8 902 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 EMC10Q5UCC4 262 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 CYP4F22Q6NT55 531 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 RHBDF2Q6PJF5 856 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 TRMT10CQ7L0Y3 403 aaKnown RBP24.42■■□□□ 1.5
MSX2-201ENST00000239243 KCTD6Q8NC69 237 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 CMASQ8NFW8 434 aaPredicted RBP24.42■■□□□ 1.5
MSX2-201ENST00000239243 ANAPC5Q9UJX4 755 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 DNPEPQ9ULA0 475 aa24.42■■□□□ 1.5
MSX2-201ENST00000239243 WARSP23381 471 aaKnown RBP24.41■■□□□ 1.5
MSX2-201ENST00000239243 CST5P28325 142 aaPredicted RBP24.41■■□□□ 1.5
MSX2-201ENST00000239243 VCPP55072 806 aaKnown RBP24.41■■□□□ 1.5
MSX2-201ENST00000239243 LEKR1Q6ZMV7 388 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 CEP128Q6ZU80 1094 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 BBS12Q6ZW61 710 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 REM2Q8IYK8 340 aaPredicted RBP24.41■■□□□ 1.5
MSX2-201ENST00000239243 FAM118BQ9BPY3 351 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 DPEP3Q9H4B8 488 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 ITGAVP06756 1048 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 ASGR1P07306 291 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 KLRC2P26717 231 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 SCNN1AP37088 669 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 ITGA8P53708 1063 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 TRIP13Q15645 432 aaPredicted RBP24.41■■□□□ 1.5
MSX2-201ENST00000239243 KRT71Q3SY84 523 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 KCNT1Q5JUK3 1230 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 KDM7AQ6ZMT4 941 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 ARFGAP2Q8N6H7 521 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 EPB41L4BQ9H329 900 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 CENPHQ9H3R5 247 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 PCSK1NQ9UHG2 260 aa24.41■■□□□ 1.5
MSX2-201ENST00000239243 SHOX2O60902 331 aaPredicted RBP24.4■■□□□ 1.5
MSX2-201ENST00000239243 CHRNA1P02708 482 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 PDGFRBP09619 1106 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 CTSHP09668 335 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 FGFR1P11362 822 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 ACADSBP45954 432 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 MGAT3Q09327 533 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 SH2D3CQ8N5H7 860 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 ALLCQ8N6M5 410 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 PCSK9Q8NBP7 692 aaKnown RBP24.4■■□□□ 1.5
MSX2-201ENST00000239243 KLHDC9Q8NEP7 349 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 FOXP3Q9BZS1 431 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 RSAD1Q9HA92 442 aa24.4■■□□□ 1.5
MSX2-201ENST00000239243 PIK3R2O00459 728 aa24.39■■□□□ 1.5
MSX2-201ENST00000239243 TP73O15350 636 aa24.39■■□□□ 1.5
MSX2-201ENST00000239243 PRPSAP2O60256 369 aa24.39■■□□□ 1.5
MSX2-201ENST00000239243 NR1D1P20393 614 aa24.39■■□□□ 1.5
MSX2-201ENST00000239243 TRIM32Q13049 653 aa24.39■■□□□ 1.5
MSX2-201ENST00000239243 GPBP1L1Q9HC44 474 aaPredicted RBP24.39■■□□□ 1.5
MSX2-201ENST00000239243 TULP2O00295 520 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 PRKAR2AP13861 404 aaKnown RBP24.39■■□□□ 1.49
MSX2-201ENST00000239243 SDC4P31431 198 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 SP3Q02447 781 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 OASLQ15646 514 aaKnown RBP24.39■■□□□ 1.49
MSX2-201ENST00000239243 KCNA10Q16322 511 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 ZFP42Q96MM3 310 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 CAPS2Q9BXY5 557 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 SEMA4AQ9H3S1 761 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 GIT1Q9Y2X7 761 aa24.39■■□□□ 1.49
MSX2-201ENST00000239243 RIPK2O43353 540 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 LMO2P25791 158 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 ACTN2P35609 894 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 RPL34P49207 117 aaKnown RBP24.38■■□□□ 1.49
MSX2-201ENST00000239243 SLC29A2Q14542 456 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 ARCQ7LC44 396 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 CCDC25Q86WR0 208 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 SLC35B2Q8TB61 432 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 HSPH1Q92598 858 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 WNT8BQ93098 351 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 PIWIL1Q96J94 861 aaKnown RBP24.38■■□□□ 1.49
MSX2-201ENST00000239243 HSFY1Q96LI6 401 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 TSPYL2Q9H2G4 693 aaPredicted RBP24.38■■□□□ 1.49
MSX2-201ENST00000239243 PAPSS1O43252 624 aaPredicted RBP24.38■■□□□ 1.49
MSX2-201ENST00000239243 CST8O60676 142 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 THP07101 528 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 CCDC130P13994 396 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 ADORA2BP29275 332 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 VPS41P49754 854 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 SLC8A3P57103 927 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 PLCB3Q01970 1234 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 IZUMO3Q5VZ72 239 aa24.38■■□□□ 1.49
MSX2-201ENST00000239243 CCND3P30281 292 aaPredicted RBP24.37■■□□□ 1.49
MSX2-201ENST00000239243 RAB27AP51159 221 aa24.37■■□□□ 1.49
MSX2-201ENST00000239243 PTGISQ16647 500 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms