RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 LRRC14BA6NHZ5 514 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 PCNAP12004 261 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 HERVK_113P62684 666 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 TBL3Q12788 808 aaKnown RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 MRPL28Q13084 256 aaKnown RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 ITPK1Q13572 414 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 PTGISQ16647 500 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 GSTA3Q16772 222 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 FEZF2Q8TBJ5 459 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 OSBPL8Q9BZF1 889 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 SPATC1LQ9H0A9 340 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 FBXO44Q9H4M3 255 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 SETD4Q9NVD3 440 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 BLOC1S6Q9UL45 172 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 SMG5Q9UPR3 1016 aaKnown RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 CAB39Q9Y376 341 aaPredicted RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 ESYT3A0FGR9 886 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 TBC1D12O60347 775 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 JAK1P23458 1154 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 MAP3K7CLP57077 242 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 EDRF1Q3B7T1 1238 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 AGAP9Q5VTM2 703 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 VN1R5Q7Z5H4 357 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 CACUL1Q86Y37 369 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 FAM9CQ8IZT9 166 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 HPS3Q969F9 1004 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 C7orf25Q9BPX7 421 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 PDGFCQ9NRA1 345 aa10.94□□□□□ -0.66
TRPS1-201ENST00000220888 NOP53Q9NZM5 478 aaKnown RBP10.94□□□□□ -0.66
TRPS1-201ENST00000220888 IQSEC2Q5JU85 1478 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 E2F8A0AVK6 867 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 TBC1D3BA6NDS4 549 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 SNTNA6NMZ2 147 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 CABYRO75952 493 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ZNF286BP0CG31 522 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 FGFR4P22455 802 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 GALCP54803 685 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 CXCL9Q07325 125 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 PPIL2Q13356 520 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 CCDC142Q17RM4 750 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 P3H2Q8IVL5 708 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 POMGNT2Q8NAT1 580 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 MRPL48Q96GC5 212 aaKnown RBP10.93□□□□□ -0.66
TRPS1-201ENST00000220888 CPB2Q96IY4 423 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 WNK4Q96J92 1243 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 MKNK1Q9BUB5 465 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 GNG14A0A1W2PPG7 69 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 CCDC189A1A4V9 331 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ATP5BP06576 529 aaKnown RBP10.93□□□□□ -0.66
TRPS1-201ENST00000220888 UCHL3P15374 230 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ITIH2P19823 946 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 MDH1BQ5I0G3 518 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 LUZP2Q86TE4 346 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 TLK2Q86UE8 772 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 RMND5AQ9H871 391 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 SMPD4Q9NXE4 827 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 PSMC3IPQ9P2W1 217 aaPredicted RBP10.93□□□□□ -0.66
TRPS1-201ENST00000220888 PADI4Q9UM07 663 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 MYPNQ86TC9 1320 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ADCY3O60266 1144 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 FKTNO75072 461 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 SOX11P35716 441 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ZNF557Q8N988 423 aaPredicted RBP10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ACER1Q8TDN7 264 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ECSITQ9BQ95 431 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 MIR1-1HGQ9H1L0 117 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 AHSPQ9NZD4 102 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 SLC9A3R1O14745 358 aaPredicted RBP10.93□□□□□ -0.66
TRPS1-201ENST00000220888 NUDT14O95848 222 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 GNRH1P01148 92 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 TUFMP49411 452 aaKnown RBP10.93□□□□□ -0.66
TRPS1-201ENST00000220888 CUL2Q13617 745 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 MFSD10Q14728 455 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ICE2Q659A1 982 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 STAMBPL1Q96FJ0 436 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 OMDQ99983 421 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 PHF20Q9BVI0 1012 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 ABHD16BQ9H3Z7 469 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 KRT84Q9NSB2 600 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 SPG21Q9NZD8 308 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 AMACRQ9UHK6 382 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 POLR1DQ9Y2S0 133 aa10.93□□□□□ -0.66
TRPS1-201ENST00000220888 SAMD9LQ8IVG5 1584 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 CNTNAP2Q9UHC6 1331 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PRMT3O60678 531 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PHF2O75151 1096 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 RPN2P04844 631 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SNRPAP09012 282 aaKnown RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 TGM2P21980 687 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 CTNNB1P35222 781 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 FNTAP49354 379 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 PTK7Q13308 1070 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 ACOX1Q15067 660 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 GRIK4Q16099 956 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SHROOM1Q2M3G4 852 aaPredicted RBP10.92□□□□□ -0.66
TRPS1-201ENST00000220888 SEZ6Q53EL9 994 aa10.92□□□□□ -0.66
TRPS1-201ENST00000220888 METTL7BQ6UX53 244 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms