RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 CLNKQ7Z7G1 428 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 TMEM192Q8IY95 271 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 LRRC71Q8N4P6 559 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 FBXO27Q8NI29 283 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 CALN1Q9BXU9 219 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 CADM1Q9BY67 442 aaKnown RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 HMGXB4Q9UGU5 601 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 XPO7Q9UIA9 1087 aaKnown RBP16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 A0A0G2JMZ2 1700 aa16.59■□□□□ 0.25
SNAPC1-201ENST00000216294 DKC1O60832 514 aaKnown RBP eCLIP16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 LRCH4O75427 683 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 TOP3BO95985 862 aaKnown RBP16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 NEFHP12036 1026 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 ICAM3P32942 547 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 CAPSQ13938 189 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 PRPF39Q86UA1 669 aaKnown RBP16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 TRIM50Q86XT4 487 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 PALM2Q8IXS6 379 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 GRAMD1AQ96CP6 724 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 RAB3IPQ96QF0 476 aaPredicted RBP16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 CGRRF1Q99675 332 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 PLCD4Q9BRC7 762 aa16.58■□□□□ 0.25
SNAPC1-201ENST00000216294 A0A0B4J269 797 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 CCDC195A0A1B0GUA6 201 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 KRT19P08727 400 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 CETN2P41208 172 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 PTDSS1P48651 473 aaKnown RBP16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 CCDC142Q17RM4 750 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 CTC1Q2NKJ3 1217 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 AGGF1Q8N302 714 aaeCLIP16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 CYLDQ9NQC7 956 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 ZNF302Q9NR11 478 aa16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 FARP1Q9Y4F1 1045 aaPredicted RBP16.58■□□□□ 0.24
SNAPC1-201ENST00000216294 EME2A4GXA9 379 aaPredicted RBP16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 UGT1A9O60656 530 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 KITP10721 976 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 CALB2P22676 271 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 GCKP35557 465 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 ELK3P41970 407 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 CCDC15Q0P6D6 951 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 FAAP100Q0VG06 881 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 Q3C1V9 767 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 XKR3Q5GH77 459 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 DPY19L2Q6NUT2 758 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 CDHR3Q6ZTQ4 885 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 SLC35B2Q8TB61 432 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 SHKBP1Q8TBC3 707 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 DCAKDQ8WVC6 231 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 RSAD2Q8WXG1 361 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 OSBPL1AQ9BXW6 950 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 UGT1A7Q9HAW7 530 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 UGT1A10Q9HAW8 530 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 UGT1A8Q9HAW9 530 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 MARCOQ9UEW3 520 aaPredicted RBP16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 NR2E3Q9Y5X4 410 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 FAM237BA0A1B0GVD1 139 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 SMNDC1O75940 238 aaKnown RBP eCLIP16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 PYGBP11216 843 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 EDNRBP24530 442 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 PCK1P35558 622 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 CDO1Q16878 200 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 KBTBD12Q3ZCT8 623 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 RINLQ6ZS11 566 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 USP50Q70EL3 339 aaPredicted RBP16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 RFX6Q8HWS3 928 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 STK32AQ8WU08 396 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 MZB1Q8WU39 189 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 CPXM1Q96SM3 734 aa16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 SMG5Q9UPR3 1016 aaKnown RBP16.57■□□□□ 0.24
SNAPC1-201ENST00000216294 CXCL11O14625 94 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 KRT36O76013 467 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 ALDH3A1P30838 453 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 SLC8A3P57103 927 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 EFHC2Q5JST6 749 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 CAPRIN2Q6IMN6 1127 aaKnown RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 ANO7Q6IWH7 933 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 ALYREFQ86V81 257 aaKnown RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 RIBC1Q8N443 379 aaPredicted RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 NAT8LQ8N9F0 302 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 WDR60Q8WVS4 1066 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 TRAPPC12Q8WVT3 735 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 PRPF31Q8WWY3 499 aaKnown RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 CFAP36Q96G28 342 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 PIWIL1Q96J94 861 aaKnown RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 PORCNQ9H237 461 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 MANSC1Q9H8J5 431 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 MAFBQ9Y5Q3 323 aaPredicted RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 BRCA2P51587 3418 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 BPTFQ12830 3046 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 CCDC189A1A4V9 331 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 DCTN3O75935 186 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 FARP2O94887 1054 aaPredicted RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 OATP04181 439 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 ZNF132P52740 706 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 YWHAGP61981 247 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 SLC25A11Q02978 314 aaKnown RBP16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 LMNB2Q03252 620 aa16.56■□□□□ 0.24
SNAPC1-201ENST00000216294 KPNB1Q14974 876 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms