RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 PRMT6Q96LA8 375 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 POLLQ9UGP5 575 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 INO80Q9ULG1 1556 aaPredicted RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 A0A1W2PQJ5 194 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 TISP43B9A030 160 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM86B1E9PN63 330 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 CLK1P49759 484 aaKnown RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 RAD51Q06609 339 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 TRIM25Q14258 630 aaKnown RBP14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 DEFB129Q9H1M3 183 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 LCMT1Q9UIC8 334 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 GRID1Q9ULK0 1009 aa14.11□□□□□ -0.15
TGFBR3-201ENST00000212355 AP1G2O75843 785 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 NQO1P15559 274 aaKnown RBP14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 CCND1P24385 295 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ARHGEF19Q8IW93 802 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ROGDIQ9GZN7 287 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 TULP4Q9NRJ4 1543 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 RNF103O00237 685 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 PCNAP12004 261 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 FGFR3P22607 806 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 MAPK7Q13164 816 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 DAB2IPQ5VWQ8 1189 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ANKS3Q6ZW76 656 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ZSCAN18Q8TBC5 510 aaPredicted RBP14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 MYCBPAPQ8TBZ2 947 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 RSAD1Q9HA92 442 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 PCDHB7Q9Y5E2 793 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 IGSF9BQ9UPX0 1349 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 AKAP5P24588 427 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ACAT1P24752 427 aaKnown RBP14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 GIT2Q14161 759 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 SV2CQ496J9 727 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 SBK1Q52WX2 424 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 SLC30A9Q6PML9 568 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 CSF1RP07333 972 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 FAM200BP0CF97 657 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 HSMCR30P0CW71 290 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 DPEP1P16444 411 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ST8SIA6P61647 398 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 CSHL1Q14406 222 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 PDK1Q15118 436 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 TFAP2DQ7Z6R9 452 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 NT5DC3Q86UY8 548 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 MMGT1Q8N4V1 131 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 TAS1R2Q8TE23 839 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 VMP1Q96GC9 406 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 FICDQ9BVA6 458 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ATXN3LQ9H3M9 355 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ANKZF1Q9H8Y5 726 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 TMBIM4Q9HC24 238 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 GIMAP4Q9NUV9 329 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 DMGDHQ9UI17 866 aaKnown RBP14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 TSC22D4Q9Y3Q8 395 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ERI2A8K979 691 aaKnown RBP14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 UBOX5O94941 541 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 APOA1P02647 267 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 LTFP02788 710 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ATP6V1B2P21281 511 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 S100A5P33763 92 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 STRA8Q7Z7C7 330 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 C10orf53Q8N6V4 93 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 ARMCX1Q9P291 453 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 IQGAP3Q86VI3 1631 aa14.1□□□□□ -0.15
TGFBR3-201ENST00000212355 MYL6P60660 151 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 LAMC2Q13753 1193 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CRLS1Q9UJA2 301 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CPS1P31327 1500 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 WTIPA6NIX2 430 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SAC3D1A6NKF1 404 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 TRAF7Q6Q0C0 670 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 TSPAN17Q96FV3 270 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 RPRD1AQ96P16 312 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SH3GL3Q99963 347 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SAE1Q9UBE0 346 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 PRR23D1E9PI22 279 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 KLHL2O95198 593 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 PRR23D2P0DMB1 279 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CORO7P57737 925 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 FBXO25Q8TCJ0 367 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 TRAPPC12Q8WVT3 735 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 ARHGAP20Q9P2F6 1191 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CCL15-CCL14A0A0B4J2E2 113 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SMIM22K7EJ46 135 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 ZNF682O95780 498 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SP100P23497 879 aaPredicted RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 ABCE1P61221 599 aaKnown RBP14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CCL15Q16663 113 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 CCDC103Q8IW40 242 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 POU5F2Q8N7G0 328 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 NETO2Q8NC67 525 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 GLMNQ92990 594 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 SGSM3Q96HU1 749 aa14.09□□□□□ -0.15
TGFBR3-201ENST00000212355 FOPNLQ96NB1 174 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms