RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 CDR1P51861 262 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 GDF10P55107 478 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 ZNF200P98182 395 aaPredicted RBP27.35■■□□□ 1.97
RTN4R-201ENST00000043402 CCL14Q16627 93 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 RXFP2Q8WXD0 754 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 ASNSD1Q9NWL6 643 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 IGF2BP3O00425 579 aaKnown RBP eCLIP27.35■■□□□ 1.97
RTN4R-201ENST00000043402 PECAM1P16284 738 aaPredicted RBP27.35■■□□□ 1.97
RTN4R-201ENST00000043402 GPD1P21695 349 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 YARSP54577 528 aaKnown RBP27.35■■□□□ 1.97
RTN4R-201ENST00000043402 C15orf59Q2T9L4 293 aaPredicted RBP27.35■■□□□ 1.97
RTN4R-201ENST00000043402 RNASEH2BQ5TBB1 312 aaKnown RBP27.35■■□□□ 1.97
RTN4R-201ENST00000043402 FOXP3Q9BZS1 431 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 RRAGCQ9HB90 399 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 PCDH9Q9HC56 1237 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 FAM49BQ9NUQ9 324 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 CNTN3Q9P232 1028 aa27.35■■□□□ 1.97
RTN4R-201ENST00000043402 DNAH12Q6ZR08 3092 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 FOXO6A8MYZ6 492 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 TCEA3O75764 348 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 PCK1P35558 622 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 APBB1IPQ7Z5R6 666 aaPredicted RBP27.34■■□□□ 1.97
RTN4R-201ENST00000043402 LPIN3Q9BQK8 851 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 CNPY3Q9BT09 278 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 APOL6Q9BWW8 343 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 RASSF4Q9H2L5 321 aa27.34■■□□□ 1.97
RTN4R-201ENST00000043402 TREHO43280 583 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 CREB1P16220 341 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 PDGFRAP16234 1089 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 BEST2Q8NFU1 509 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 HAS3O00219 553 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 HCRTO43612 131 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 GABBR2O75899 941 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 STILQ15468 1287 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 SOWAHAQ2M3V2 549 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 C9orf57Q5W0N0 161 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 LRRC52Q8N7C0 313 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 ARHGEF2Q92974 986 aaKnown RBP27.33■■□□□ 1.97
RTN4R-201ENST00000043402 TRIM6Q9C030 488 aaPredicted RBP27.33■■□□□ 1.97
RTN4R-201ENST00000043402 SAYSD1Q9NPB0 183 aa27.33■■□□□ 1.97
RTN4R-201ENST00000043402 FASTKD3Q14CZ7 662 aaKnown RBP27.32■■□□□ 1.96
RTN4R-201ENST00000043402 MORF4L2Q15014 288 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 SNX17Q15036 470 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 CCDC142Q17RM4 750 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 CYP4F22Q6NT55 531 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 CYP4X1Q8N118 509 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 TTC13Q8NBP0 860 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 PDCD11Q14690 1871 aaKnown RBP27.32■■□□□ 1.96
RTN4R-201ENST00000043402 ENDOD1O94919 500 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 PSEN2P49810 448 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 BEX3Q00994 111 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 MMRN1Q13201 1228 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 PCBP1Q15365 356 aaKnown RBP eCLIP27.32■■□□□ 1.96
RTN4R-201ENST00000043402 OLFML1Q6UWY5 402 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 TAOK1Q7L7X3 1001 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 RFX6Q8HWS3 928 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 SLC35F5Q8WV83 523 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 KHSRPQ92945 711 aaKnown RBP eCLIP27.32■■□□□ 1.96
RTN4R-201ENST00000043402 CALN1Q9BXU9 219 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 DPEP3Q9H4B8 488 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 KLK14Q9P0G3 267 aa27.32■■□□□ 1.96
RTN4R-201ENST00000043402 PIN4Q9Y237 131 aaKnown RBP27.32■■□□□ 1.96
RTN4R-201ENST00000043402 C5orf60A6NFR6 353 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 CDO1Q16878 200 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 CCDC14Q49A88 953 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 CFAP57Q96MR6 1250 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 ZNF317Q96PQ6 595 aaPredicted RBP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 SLC4A5Q9BY07 1137 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 RNF39Q9H2S5 420 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 INTS9Q9NV88 658 aaKnown RBP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 DDX20Q9UHI6 824 aaKnown RBP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 PDE4CQ08493 712 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 IRF5Q13568 498 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 HP1BP3Q5SSJ5 553 aaPredicted RBP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 OR6B3Q8NGW1 331 aa27.31■■□□□ 1.96
RTN4R-201ENST00000043402 PRCCQ92733 491 aaPredicted RBP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 FRMD8P1Q9BZ68 369 aaPredicted RBP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.31■■□□□ 1.96
RTN4R-201ENST00000043402 DRD4P21917 467 aa27.3■■□□□ 1.96
RTN4R-201ENST00000043402 TMEM110Q86TL2 294 aa27.3■■□□□ 1.96
RTN4R-201ENST00000043402 SCUBE3Q8IX30 993 aa27.3■■□□□ 1.96
RTN4R-201ENST00000043402 USP6NLQ92738 828 aa27.3■■□□□ 1.96
RTN4R-201ENST00000043402 MIS12Q9H081 205 aa27.3■■□□□ 1.96
RTN4R-201ENST00000043402 FARP1Q9Y4F1 1045 aaPredicted RBP27.3■■□□□ 1.96
RTN4R-201ENST00000043402 SMIM28A0A1B0GU29 152 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 APOC4-APOC2K7ER74 178 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 APOC2P02655 101 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 HUNKP57058 714 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 UBXN11Q5T124 520 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 UNC45BQ8IWX7 931 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 CHMP6Q96FZ7 201 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 PRMT1Q99873 361 aaKnown RBP27.29■■□□□ 1.96
RTN4R-201ENST00000043402 EURLQ9NYK6 297 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 UBQLN1Q9UMX0 589 aaKnown RBP27.29■■□□□ 1.96
RTN4R-201ENST00000043402 SHOC2Q9UQ13 582 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 NAALADL1Q9UQQ1 740 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.29■■□□□ 1.96
RTN4R-201ENST00000043402 PIRO00625 290 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 SPTLC1O15269 473 aa27.29■■□□□ 1.96
RTN4R-201ENST00000043402 MYL3P08590 195 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms