RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Nrg1Q6DR99 700 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Olfr1105Q7TR58 312 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Vat1lQ80TB8 417 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Llgl1Q80Y17 1036 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Rhot1Q8BG51 631 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Tph2Q8CGV2 488 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Epn2Q8CHU3 595 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Prrg2Q8R182 198 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 ParvaQ9EPC1 372 aa23.84■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Ppfia4B8QI36 1187 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Scgb2b7D3YYY1 112 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Ap1m1P35585 423 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Ighmbp2P40694 993 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Eef1dP57776 281 aaKnown RBP23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Anp32eP97822 260 aaKnown RBP23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Myadml2Q08AU7 307 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 ZufspQ3T9Z9 577 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Acvr1cQ8K348 493 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Dr1Q91WV0 176 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 MajinQ9D992 256 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 Anxa9Q9JHQ0 345 aa23.83■■□□□ 1.41
Scn1b-201ENSMUST00000098548 1700031M16RikA0A087WSH0 82 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Fam81bA0A140LI28 432 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Dennd5bA2RSQ0 1274 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Hoxb8P09632 243 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Resp18P47939 175 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 GscQ02591 256 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Trim21Q62191 470 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Polr2eQ80UW8 210 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tmem145Q8C4U2 746 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cpa5Q8R4H4 436 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Slc13a3Q91Y63 600 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Pcyox1Q9CQF9 505 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 3830403N18RikQ9D6C3 208 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Lrrc46Q9DAP0 323 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tp53bp1P70399 1969 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Baz2aQ91YE5 1889 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Samd1D3YXK1 519 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Itgb1P09055 798 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Lmo2P25801 158 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 SftpdP50404 374 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ephb3P54754 993 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ctnnb1Q02248 781 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ice2Q3UZ18 988 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gm5168Q4KL04 211 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Trim6Q8BGE7 488 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 MylipQ8BM54 445 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Pwp2Q8BU03 919 aaKnown RBP23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Pyhin1Q8BV49 420 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 4931406P16RikQ8C5X1 1059 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Zdhhc3Q8R173 299 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tmprss4Q8VCA5 435 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Tpgs1Q99MS8 303 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Spg21Q9CQC8 308 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Rtn3Q9ES97 964 aa23.82■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gm6657A0A1B0GRJ3 277 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Bpifb9bA2AJD1 591 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Lrrc73B2RWC4 316 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Hsd17b14E9Q3D4 273 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Serpinb6bO08804 377 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Smpd2O70572 419 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 ProcP33587 460 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Frg1P97376 258 aaKnown RBP23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Mvb12bQ6KAU4 317 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cfap97Q6ZPR1 541 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Proser3Q7TSA6 634 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Plxna4Q80UG2 1893 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Bpifb9aQ80XI7 591 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Syt15Q8C6N3 418 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Epc1Q8C9X6 813 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ulbp1Q8HWA3 334 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Uroc1Q8VC12 676 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 MrgpreQ91ZB7 310 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Smc1aQ9CU62 1233 aaKnown RBP23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Bnip3lQ9Z2F7 218 aa23.81■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Igkv17-121A0A0G2JFA8 117 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 E9QMW4 1145 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Gm3182K7N6T8 263 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 TertO70372 1122 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Btg3P50615 252 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cbx1P83917 185 aaKnown RBP23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Smyd1P97443 490 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Bbof1Q3V079 533 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Olfr412Q7TRW7 312 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Cct8l1Q80YT3 562 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 ToporsQ80Z37 1033 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Mical2Q8BML1 960 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Rxfp2Q91ZZ5 737 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Dpp3Q99KK7 738 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 QpctQ9CYK2 362 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Rasgrp1Q9Z1S3 795 aa23.8■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Mindy4b-psA0A1W2P7H6 457 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Impa1O55023 277 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Fgf18O89101 207 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Lsp1P19973 330 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Ptk2P34152 1090 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Stat5aP42230 793 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Akr1b8P45377 316 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Agbl1Q09M05 972 aa23.79■■□□□ 1.4
Scn1b-201ENSMUST00000098548 Q3UE31 404 aa23.79■■□□□ 1.4
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms