RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Snapc2Q91XA5 359 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Nlgn1Q99K10 843 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Psmd12Q9D8W5 456 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rassf7Q9DD19 359 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ube3bQ9ES34 1070 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cib1Q9Z0F4 191 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sipa1l2Q80TE4 1722 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 TnrQ8BYI9 1358 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zscan4-ps1A0A1C7CYV3 506 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rnf19bA2A7Q9 732 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Arhgef10lA2AWP8 1280 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Armt1A6H630 439 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zscan4dA7KBS4 506 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Fbrsl1E9Q9T0 1031 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ptar1E9QAB6 424 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tuba3aP05214 450 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 PolP11369 1281 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 ChrneP20782 493 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Eps15P42567 897 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tuba1cP68373 449 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Fgfr4Q03142 799 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Q3TYL0 343 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm648Q3UJ22 213 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zbtb16Q3UQ17 673 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zscan4fQ3URS2 506 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Eif2dQ61211 570 aaKnown RBP10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Itga2Q62469 1178 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zscan4cQ80VJ6 506 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 IfneQ80ZF2 192 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Igdcc3Q8BQC3 813 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Kctd12bQ8C7J6 292 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 GanQ8CA72 597 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Zc2hc1cQ8CCG1 527 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rmnd1Q8CI78 450 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sh2d5Q8JZW5 429 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 PdxkQ8K183 312 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dennd2dQ91VV4 469 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hdac9Q99N13 588 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Armc8Q9DBR3 673 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tfap4Q9JIZ5 338 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hey2Q9QUS4 339 aa10.12□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cyp4a32A2A8T1 509 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pcsk6F6XJP7 959 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Barx2O08686 283 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cbfa2t2O70374 594 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Icam1P13597 537 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hspa2P17156 633 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 IvlP48997 467 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dpf3P58269 378 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gabrb3P63080 473 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Traf6P70196 530 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gpr162Q3UN16 588 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Phf12Q5SPL2 1003 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Stx3Q64704 289 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 SpopQ6ZWS8 374 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Olfr1037Q7TR84 321 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Oscp1Q8BHW2 379 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rsl1d1Q8BVY0 452 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Klhl2Q8JZP3 593 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rps6kl1Q8R2S1 544 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ces1dQ8VCT4 565 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cabp4Q8VHC5 271 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pls3Q99K51 630 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cnot11Q9CWN7 505 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Spcs2Q9CYN2 226 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hmgn3Q9DCB1 99 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 GhrlQ9EQX0 117 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Lima1Q9ERG0 753 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Rnf103Q9R1W3 683 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Crlf3Q9Z2L7 442 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Map3k15A2AQW0 1331 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Spata31d1aE9QA35 1336 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Gm36028A0A0U1RPM1 299 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Grin3aA2AIR5 1135 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ces1aE9PYP1 563 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Cdh19E9Q3A7 770 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Clk3O35492 638 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Tcea3P23881 347 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Bmpr1aP36895 532 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Sipa1P46062 1037 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 ErfP70459 551 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hoxd1Q01822 328 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Pcnx4Q3UVY5 1174 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Hipk4Q3V016 616 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ubn1Q4G0F8 1135 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Opa3Q505D7 179 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Chsy3Q5DTK1 884 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Myo1dQ5SYD0 1006 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ddx5Q61656 614 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ugt1a9Q62452 528 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 RgmbQ7TQ33 436 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Ints2Q80UK8 1198 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Klhl42Q8BFQ9 493 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Psmd11Q8BG32 422 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Atl1Q8BH66 558 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Samd4aQ8CBY1 711 aaKnown RBP10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Galnt13Q8CF93 556 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Dqx1Q924H9 718 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Lysmd3Q99LE3 305 aa10.11□□□□□ -0.79
Hmgb1-201ENSMUST00000085546 Mdm1Q9D067 708 aa10.11□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms