RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Tesk2Q8VCT9 570 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Asah2Q9JHE3 756 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Foxd1Q61345 456 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Pde1aQ61481 565 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 SvoplQ6PDF3 494 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Dennd2aQ8C4S8 1000 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Mtif2Q91YJ5 727 aaKnown RBP12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Mrfap1Q9CQL7 125 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Scgb2b20Q9JI02 112 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Vmn2r23E9PXI5 849 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 D830030K20RikE9PYQ5 218 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Spata31E9QAF0 1014 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Gm3043K7N693 218 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Grk4O70291 574 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Usp7Q6A4J8 1103 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Hmgxb4Q80Y32 594 aaKnown RBP12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 BsndQ8VIM4 307 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 4933425L06RikQ9D3Z8 585 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Smok2bQ9QYZ3 484 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Smok2aQ9QYZ6 504 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Usp32F8VPZ3 1604 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Ccnd2P30280 289 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Rasa2P58069 847 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Nr1h2Q60644 446 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Ubap1Q8BH48 502 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Zhx2Q8C0C0 836 aaKnown RBP12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Rhbdl2A2AGA4 302 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 C1orf109Q499E6 217 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Pla2g4dQ50L43 825 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 DcstampQ7TNJ0 470 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Olfr119Q7TRJ5 321 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Fam102bQ8BQS4 339 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Tmtc3Q8BRH0 920 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Gm8113E0CXS8 587 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Pdap1Q3UHX2 181 aaKnown RBP12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Bsdc1Q80Y55 427 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Sertad1Q9JL10 236 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Bmp15Q9Z0L4 392 aa12.84□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Cdh16O88338 830 aa12.83□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 InaP46660 501 aa12.83□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Rbp3P49194 1234 aa12.83□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 CamkvQ3UHL1 512 aa12.83□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Abca6Q8K441 1624 aa12.83□□□□□ -0.35
Vcpip1-201ENSMUST00000057438 Drg1P32233 367 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 NcstnP57716 708 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Rbp1Q00915 135 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Cyp4x1Q6A152 507 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Cep78Q6IRU7 790 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Atpaf2Q91YY4 289 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Aldh1a3Q9JHW9 512 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Prkab1Q9R078 270 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Ptpn4Q9WU22 926 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Fxr2Q9WVR4 673 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Cdhr2E9Q7P9 1308 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 SynrgQ5SV85 1306 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Scgb2b7D3YYY1 112 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Nmt2O70311 529 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Teddm1aQ810U2 305 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Mettl21eQ8CDZ2 244 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Mlc1Q8VHK5 382 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Gm6408J3QNG1 320 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Gnat1P20612 350 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Dnal1Q05A62 190 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Pcdha3Q91Y16 942 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 RarbP22605 482 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Hoxd10P28359 340 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Usp4P35123 962 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Plekhm3Q8BM47 761 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Chrna3Q8R4G9 499 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Dcaf6Q9DC22 876 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 MkksQ9JI70 570 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Hao1Q9WU19 370 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Dennd5bA2RSQ0 1274 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Tp53P02340 387 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Q8BWQ6 963 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Ccdc28bQ8CEG5 200 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Slc47a1Q8K0H1 567 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Tmed5Q9CXE7 229 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Nusap1Q9ERH4 427 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Gm21964A0A1W2P7S4 437 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Cdca2Q14B71 982 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 BC051142Q3V0M8 400 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Rc3h1Q4VGL6 1130 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Rps6ka6Q7TPS0 764 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 RnmtQ9D0L8 465 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Echdc3Q9D7J9 300 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Ap3m1Q9JKC8 418 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 QkiQ9QYS9 341 aaKnown RBP12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Large1Q9Z1M7 756 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Eif2ak3Q9Z2B5 1114 aa12.83□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Klra7Q60654 280 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Ddx3xQ62167 662 aaKnown RBP12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Q8K2W9 541 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Tnfaip8Q921Z5 198 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Pgm3Q9CYR6 542 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Ift46Q9DB07 301 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Ppp2r3cQ9JK24 453 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Gipc2Q9Z2H7 314 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Mroh2aD3Z750 1679 aa12.82□□□□□ -0.36
Vcpip1-201ENSMUST00000057438 Zdhhc9P59268 364 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms