RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Acad11Q80XL6 779 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Aldh4a1Q8CHT0 562 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Pcdhgb1Q91XX8 918 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ophn1Q99J31 802 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sdcbp2Q99JZ0 292 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 ErmapQ9JLN5 566 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sbf2E9PXF8 1872 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mia3Q8BI84 1930 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Scgb2b18A0A087WPA9 112 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Slc4a11A2AJN7 862 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Krt90E9Q1Z0 538 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm5689F6Y2A6 97 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Hk1P17710 974 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Dlg3P70175 849 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Hoxb13P70321 286 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Plk1Q07832 603 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Xkr4Q5GH67 647 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fnip1Q68FD7 1165 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Shkbp1Q6P7W2 704 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tceal5Q8CCT4 200 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Krt222Q8CCX5 294 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Bicdl2Q8CHW5 507 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cox18Q8VC74 331 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Lpin2Q99PI5 893 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ifi35Q9D8C4 286 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Abcb6Q9DC29 842 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cib2Q9Z309 187 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Myo1eE9Q634 1107 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm11236J3QMS7 360 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cacna2d1O08532 1103 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 KlO35082 1014 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Aoc3O70423 765 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cldn2O88552 230 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 SftpdP50404 374 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Trim72Q1XH17 477 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rnf40Q3U319 1001 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sec31aQ3UPL0 1230 aaKnown RBP7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Kctd19Q562E2 927 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 LnpkQ7TQ95 425 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Arid5bQ8BM75 1188 aaKnown RBP7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Dnm3Q8BZ98 863 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 SarafQ8R3Q0 334 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Pcdhgb4Q91XX6 912 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fuca1Q99LJ1 452 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mxra7Q9CZH7 178 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rmi1Q9D4G9 616 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Olfr711Q9EPG2 314 aa7.24□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm36028A0A0U1RPM1 299 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cdh18E9Q9Q6 790 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cldn5O54942 218 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 PargO88622 969 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 F9P16294 471 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mfsd14aP70187 490 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 G3bp2P97379 482 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rplp2P99027 115 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ap5z1Q3U829 807 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Gm5935Q497S0 212 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Nab2Q61127 525 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 PostnQ62009 838 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sh3gl3Q62421 347 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp3a16Q64481 504 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Nlrp14Q6B966 993 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Zfp512bQ6PHP4 879 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Krit1Q6S5J6 736 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fam102aQ78T81 392 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rimbp2Q80U40 1072 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Bola2Q8BGS2 86 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Kat14Q8CID0 779 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Tcp11l2Q8K1H7 517 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Spats2lQ91WJ7 558 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Fam133bQ9CVI2 245 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Mrps9Q9D7N3 390 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 1700123K08RikQ9D991 295 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Dcaf6Q9DC22 876 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Scyl1Q9EQC5 806 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Krt71Q9R0H5 524 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp2t4E9PWV0 503 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Calhm3J3QMI4 347 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Diaph2O70566 1098 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Plk2P53351 682 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 PtpaP58389 323 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 SnrpfP62307 86 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 DsppP97399 934 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Ect2Q07139 913 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Frem3Q5H8B9 2123 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Slc30a9Q5IRJ6 567 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 PtprjQ64455 1238 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 GmipQ6PGG2 971 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Csnk1g3Q8C4X2 424 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Syt15Q8C6N3 418 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Eif2b5Q8CHW4 717 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Acad9Q8JZN5 625 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 P3h4Q8K2B0 443 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rell1Q8K2J7 272 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Sntg2Q925E0 539 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Clp1Q99LI9 425 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rpa3Q9CQ71 121 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Cyp2c55Q9D816 490 aa7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Eef1gQ9D8N0 437 aaKnown RBP7.23□□□□□ -1.25
Bdnf-201ENSMUST00000053317 Rmdn1Q9DCV4 305 aa7.23□□□□□ -1.25
Retrieved 100 of 22,080 RNA–protein pairs in 28.8 ms