RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Grb7Q03160 535 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Togaram2Q3TYG6 1002 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Gm29609Q3UU56 907 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ccdc160Q3UYG1 323 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Nab1Q61122 486 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Atg9bQ6EBV9 922 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Rad54bQ6PFE3 886 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ankzf1Q80UU1 748 aaKnown RBP19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Gtf3c2Q8BL74 907 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Qsox1Q8BND5 748 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Stx18Q8VDS8 334 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Decr1Q9CQ62 335 aaKnown RBP19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tmco5aQ9D9D5 303 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ropn1Q9ESG2 212 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 B4galt5Q9JMK0 388 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Plod3Q9R0E1 741 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Mbd1Q9Z2E2 636 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Apol11aE9PZG0 334 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ccdc85cE9Q6B2 420 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ptpn11P35235 597 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Dynlt1P51807 113 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Mphosph8Q3TYA6 858 aaKnown RBP19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Mif4gdQ3UBZ5 222 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Yipf3Q3UDR8 347 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Syce2Q505B8 171 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Trpa1Q8BLA8 1125 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Fam151aQ8QZW3 608 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Upb1Q8VC97 393 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Pomgnt1Q91X88 660 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Trps1Q925H1 1281 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Rex1bdQ9CYZ6 169 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Sgf29Q9DA08 293 aaKnown RBP19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 B3galt4Q9Z0F0 371 aa19.56■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 1700064H15RikD3Z4D4 81 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Hsd17b14E9Q3D4 273 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Plekha5E9Q6H8 1269 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Zfp275G3X904 499 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Vmn2r39L7N2E5 861 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 PigrO70570 771 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Gabrb2P63137 512 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 NyxP83503 476 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Npas2P97460 816 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tars2Q3UQ84 723 aaKnown RBP19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Grm6Q5NCH9 871 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Spata24Q6P926 205 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Supt20hQ7TT00 530 aaKnown RBP19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Atad3Q925I1 591 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 MutyhQ99P21 515 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Atp8b4A2ANX3 1194 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Mnat1P51949 309 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Samhd1Q60710 627 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Dcaf15Q6PFH3 600 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Rsl1d1Q8BVY0 452 aaKnown RBP19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Trub1Q8C0D0 338 aaKnown RBP19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tceal1Q921P9 165 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Arl8bQ9CQW2 186 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Uts2Q9QZQ3 123 aa19.55■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Znf536Q8K083 1302 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Il3P01586 166 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Mark3Q03141 753 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 XiapQ60989 496 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 FcgrtQ61559 365 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 LbpQ61805 481 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Capn3Q64691 821 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Fcrl5Q68SN8 596 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 NemfQ8CCP0 1064 aaKnown RBP19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Bbs5Q9CZQ9 341 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 MceeQ9D1I5 178 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Slc25a19Q9DAM5 318 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Copg2Q9QXK3 871 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 MycsQ9Z304 431 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Nup210lQ9D2F7 1881 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tnfrsf14A0A1W2P7D5 276 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Farp1F8VPU2 1048 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 CidebO70303 219 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Myl4P09541 193 aaKnown RBP19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 M6prP24668 278 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 YwhagP61982 247 aaKnown RBP19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Fam102aQ78T81 392 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Trpm4Q7TN37 1213 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Kat14Q8CID0 779 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Stau2Q8CJ67 570 aaKnown RBP19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Q9CPS8 106 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tmem68Q9D850 329 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Kcnq4Q9JK97 696 aa19.54■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Fam47eD3YWC7 402 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tada2bD3Z4Z0 420 aaKnown RBP19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Pdcd2P46718 343 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ccng1P51945 294 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 InhbaQ04998 424 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Glt6d1Q2NKH9 311 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Grb10Q60760 621 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tas2r102Q7M717 329 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Mcph1Q7TT79 822 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Gabbr2Q80T41 940 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Ccdc68Q8BVC4 333 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Rhpn2Q8BWR8 686 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 PygbQ8CI94 843 aaKnown RBP19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Arfip2Q8K221 341 aa19.53■□□□□ 0.72
Shkbp1-201ENSMUST00000003857 Tasp1Q8R1G1 420 aa19.53■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 21.4 ms