RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W TIM13P53299 105 aa2.35□□□□□ -2.03
PRE2YPR103W YDR391CQ04170 232 aa2.35□□□□□ -2.03
PRE2YPR103W YIR021W-AQ3E739 70 aa2.35□□□□□ -2.03
PRE2YPR103W YLR361C-AQ3E795 98 aa2.35□□□□□ -2.03
PRE2YPR103W TIM8P57744 87 aa2.34□□□□□ -2.03
PRE2YPR103W AIM36Q03798 255 aa2.34□□□□□ -2.03
PRE2YPR103W CSF1Q12150 2958 aa2.34□□□□□ -2.03
PRE2YPR103W SLO1Q3E784 85 aa2.34□□□□□ -2.03
PRE2YPR103W POL2P21951 2222 aaKnown RBP2.34□□□□□ -2.04
PRE2YPR103W RAD6P06104 172 aa2.33□□□□□ -2.04
PRE2YPR103W SPS2P08459 502 aa2.33□□□□□ -2.04
PRE2YPR103W RPS28BP0C0X0 67 aaKnown RBP2.33□□□□□ -2.04
PRE2YPR103W RPS1BP23248 255 aaKnown RBP2.33□□□□□ -2.04
PRE2YPR103W MET31Q03081 177 aa2.33□□□□□ -2.04
PRE2YPR103W SDH7Q04401 133 aa2.33□□□□□ -2.04
PRE2YPR103W SCP1Q08873 200 aa2.33□□□□□ -2.04
PRE2YPR103W SPC3Q12133 184 aa2.33□□□□□ -2.04
PRE2YPR103W RDI1Q12434 202 aa2.33□□□□□ -2.04
PRE2YPR103W RPS28AQ3E7X9 67 aaPredicted RBP2.33□□□□□ -2.04
PRE2YPR103W SUA7P29055 345 aaPredicted RBP2.32□□□□□ -2.04
PRE2YPR103W YBR013CP38215 129 aa2.32□□□□□ -2.04
PRE2YPR103W PRS3P38689 320 aaKnown RBP2.32□□□□□ -2.04
PRE2YPR103W IPI1P38803 334 aaPredicted RBP2.32□□□□□ -2.04
PRE2YPR103W YEL028WP39989 153 aa2.32□□□□□ -2.04
PRE2YPR103W CCS1P40202 249 aaKnown RBP2.32□□□□□ -2.04
PRE2YPR103W MOG1P47123 218 aa2.32□□□□□ -2.04
PRE2YPR103W SNN1P48232 102 aa2.32□□□□□ -2.04
PRE2YPR103W UGX2P32772 223 aa2.31□□□□□ -2.04
PRE2YPR103W SSS1P35179 80 aa2.31□□□□□ -2.04
PRE2YPR103W YRA2P36036 203 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
PRE2YPR103W MRPL24P36525 258 aaPredicted RBP2.31□□□□□ -2.04
PRE2YPR103W YBR032WP38223 100 aa2.31□□□□□ -2.04
PRE2YPR103W YEL073CP39974 107 aa2.31□□□□□ -2.04
PRE2YPR103W GLC8P41818 229 aa2.31□□□□□ -2.04
PRE2YPR103W GLR1P41921 483 aaKnown RBP2.31□□□□□ -2.04
PRE2YPR103W RPS12P48589 143 aaKnown RBP2.31□□□□□ -2.04
PRE2YPR103W FMN1Q03778 218 aa2.31□□□□□ -2.04
PRE2YPR103W PKR1Q03880 122 aaKnown RBP2.31□□□□□ -2.04
PRE2YPR103W ATG10Q07879 167 aa2.31□□□□□ -2.04
PRE2YPR103W FCF2Q12035 217 aaPredicted RBP2.31□□□□□ -2.04
PRE2YPR103W YLR046CQ12253 270 aa2.31□□□□□ -2.04
PRE2YPR103W UTP20P35194 2493 aaKnown RBP2.31□□□□□ -2.04
PRE2YPR103W ATP5P09457 212 aa2.3□□□□□ -2.04
PRE2YPR103W FUN14P18411 198 aa2.3□□□□□ -2.04
PRE2YPR103W UBC8P28263 218 aa2.3□□□□□ -2.04
PRE2YPR103W YGL101WP53144 215 aa2.3□□□□□ -2.04
PRE2YPR103W SYM1Q06563 197 aa2.3□□□□□ -2.04
PRE2YPR103W YGL194C-AQ2V2P6 80 aa2.3□□□□□ -2.04
PRE2YPR103W YLR099W-AQ3E798 87 aa2.3□□□□□ -2.04
PRE2YPR103W MEC1P38111 2368 aa2.29□□□□□ -2.04
PRE2YPR103W COX5BP00425 151 aa2.29□□□□□ -2.04
PRE2YPR103W SRB6P32570 121 aa2.29□□□□□ -2.04
PRE2YPR103W PDX3P38075 228 aaKnown RBP2.29□□□□□ -2.04
PRE2YPR103W EMC4P53073 190 aa2.29□□□□□ -2.04
PRE2YPR103W YDR366CP87287 132 aa2.29□□□□□ -2.04
PRE2YPR103W APS2Q00381 147 aa2.29□□□□□ -2.04
PRE2YPR103W GRX5Q02784 150 aa2.29□□□□□ -2.04
PRE2YPR103W ELC1Q03071 99 aa2.29□□□□□ -2.04
PRE2YPR103W YPR114WQ06107 315 aa2.29□□□□□ -2.04
PRE2YPR103W YOR097CQ12274 175 aaPredicted RBP2.29□□□□□ -2.04
PRE2YPR103W YMR030W-AQ3E760 96 aa2.29□□□□□ -2.04
PRE2YPR103W TRA1P38811 3744 aa2.28□□□□□ -2.04
PRE2YPR103W RPL22AP05749 121 aaKnown RBP2.28□□□□□ -2.04
PRE2YPR103W YEA6P39953 335 aa2.28□□□□□ -2.04
PRE2YPR103W SNU13P39990 126 aaKnown RBP2.28□□□□□ -2.04
PRE2YPR103W TMA23Q03525 211 aa2.28□□□□□ -2.04
PRE2YPR103W CNL1Q06333 122 aa2.28□□□□□ -2.04
PRE2YPR103W YCR075W-AQ3E830 75 aa2.28□□□□□ -2.04
PRE2YPR103W PCC1Q3E833 88 aa2.28□□□□□ -2.04
PRE2YPR103W COA6Q3E846 104 aa2.28□□□□□ -2.04
PRE2YPR103W HFA1P32874 2273 aa2.28□□□□□ -2.05
PRE2YPR103W HAP3P13434 144 aa2.27□□□□□ -2.05
PRE2YPR103W YPL067CQ02754 198 aa2.27□□□□□ -2.05
PRE2YPR103W SEN15Q04675 128 aa2.27□□□□□ -2.05
PRE2YPR103W RIB3Q99258 208 aa2.27□□□□□ -2.05
PRE2YPR103W MED11Q99278 115 aa2.27□□□□□ -2.05
PRE2YPR103W UBI4P0CG63 381 aaKnown RBP2.26□□□□□ -2.05
PRE2YPR103W YPR202WQ08993 238 aa2.26□□□□□ -2.05
PRE2YPR103W UBR1P19812 1950 aa2.25□□□□□ -2.05
PRE2YPR103W MRP49P32388 137 aa2.25□□□□□ -2.05
PRE2YPR103W SWM2P40342 146 aa2.25□□□□□ -2.05
PRE2YPR103W YPR145C-AQ2V2P0 78 aa2.25□□□□□ -2.05
PRE2YPR103W VMA9Q3E7B6 73 aa2.25□□□□□ -2.05
PRE2YPR103W BUB2P26448 306 aaPredicted RBP2.24□□□□□ -2.05
PRE2YPR103W EMP24P32803 203 aaKnown RBP2.24□□□□□ -2.05
PRE2YPR103W ATG8P38182 117 aaRIP-Chip data2.24□□□□□ -2.05not detected
PRE2YPR103W YHR130CP38834 111 aa2.24□□□□□ -2.05
PRE2YPR103W RPL22BP56628 122 aaKnown RBP2.24□□□□□ -2.05
PRE2YPR103W YPR203WQ08994 102 aa2.24□□□□□ -2.05
PRE2YPR103W YNR034W-AQ3E841 98 aa2.24□□□□□ -2.05
PRE2YPR103W YIL134C-AQ45U18 67 aa2.24□□□□□ -2.05
PRE2YPR103W YER039C-AP0CD97 72 aa2.23□□□□□ -2.05
PRE2YPR103W SLM6P38343 150 aa2.23□□□□□ -2.05
PRE2YPR103W HHT1P61830 136 aa2.23□□□□□ -2.05
PRE2YPR103W MAK3Q03503 176 aa2.23□□□□□ -2.05
PRE2YPR103W LIP1Q03579 150 aa2.23□□□□□ -2.05
PRE2YPR103W AVO2Q04749 426 aa2.23□□□□□ -2.05
PRE2YPR103W PAI3P01094 68 aa2.22□□□□□ -2.05
PRE2YPR103W ANB1P19211 157 aa2.22□□□□□ -2.05
PRE2YPR103W LSM2P38203 95 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms