RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	PRE1	P22141	198 aa	Known RBP	4.3	□□□□□ -1.72
HFI1	YPL254W	PRS4	P38063	326 aa	Predicted RBP	4.3	□□□□□ -1.72
HFI1	YPL254W	YJL027C	P47063	138 aa	Predicted RBP	4.3	□□□□□ -1.72
HFI1	YPL254W	COX16	P47081	118 aa		4.3	□□□□□ -1.72
HFI1	YPL254W	YIP1	P53039	248 aa		4.3	□□□□□ -1.72
HFI1	YPL254W	BET5	Q03630	159 aa		4.3	□□□□□ -1.72
HFI1	YPL254W	RUB1	Q03919	77 aa		4.3	□□□□□ -1.72
HFI1	YPL254W	IES6	P32617	166 aa		4.29	□□□□□ -1.72
HFI1	YPL254W	PBP4	Q07362	185 aa	Known RBP	4.29	□□□□□ -1.72
HFI1	YPL254W	PPT2	Q12036	173 aa		4.29	□□□□□ -1.72
HFI1	YPL254W	DFM1	Q12743	341 aa	Known RBP	4.29	□□□□□ -1.72
HFI1	YPL254W	YLR363W-A	Q3E747	85 aa		4.29	□□□□□ -1.72
HFI1	YPL254W	RPL12A	P0CX53	165 aa	Known RBP	4.28	□□□□□ -1.72
HFI1	YPL254W	RPL12B	P0CX54	165 aa		4.28	□□□□□ -1.72
HFI1	YPL254W	SPS100	P13130	326 aa		4.28	□□□□□ -1.72
HFI1	YPL254W	PRY2	P36110	329 aa		4.28	□□□□□ -1.72
HFI1	YPL254W	YNL198C	P40166	100 aa		4.28	□□□□□ -1.72
HFI1	YPL254W	YGR025W	P53216	100 aa		4.28	□□□□□ -1.72
HFI1	YPL254W	CAB4	P53332	305 aa		4.28	□□□□□ -1.72
HFI1	YPL254W	TOR2	P32600	2474 aa	Known RBP	4.27	□□□□□ -1.73
HFI1	YPL254W	YCR023C	P25351	611 aa		4.27	□□□□□ -1.73
HFI1	YPL254W	KRE9	P39005	276 aa		4.27	□□□□□ -1.73
HFI1	YPL254W	YDL186W	P48568	277 aa		4.27	□□□□□ -1.73
HFI1	YPL254W	MST27	P53176	234 aa		4.27	□□□□□ -1.73
HFI1	YPL254W	GPI19	Q04082	140 aa		4.27	□□□□□ -1.73
HFI1	YPL254W	YBR056W-A	I2HB52	66 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	MRPL20	P22354	195 aa	Predicted RBP	4.26	□□□□□ -1.73
HFI1	YPL254W	MRP49	P32388	137 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	APS1	P35181	156 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	GPI18	P38211	433 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	NCA3	P46955	337 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	LCB3	P47013	409 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	YDR042C	Q03205	200 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	UTP23	Q12339	254 aa	Known RBP	4.26	□□□□□ -1.73
HFI1	YPL254W	YLR342W-A	Q3E810	57 aa		4.26	□□□□□ -1.73
HFI1	YPL254W	RPL27A	P0C2H6	136 aa	Known RBP	4.25	□□□□□ -1.73
HFI1	YPL254W	AGA1	P32323	725 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	YIL012W	P40551	113 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	UBC7	Q02159	165 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	YMR181C	Q03231	154 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	ATG39	Q06159	398 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	YOL160W	Q08321	113 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	DGA1	Q08650	418 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	HTL1	Q9URQ5	78 aa		4.25	□□□□□ -1.73
HFI1	YPL254W	RPL27B	P0C2H7	136 aa	Known RBP	4.24	□□□□□ -1.73
HFI1	YPL254W	YHR140W	P38842	239 aa		4.24	□□□□□ -1.73
HFI1	YPL254W	YER076C	P40049	302 aa		4.24	□□□□□ -1.73
HFI1	YPL254W	YMR103C	Q04436	120 aa		4.24	□□□□□ -1.73
HFI1	YPL254W	TMC1	Q08422	150 aa	Predicted RBP	4.24	□□□□□ -1.73
HFI1	YPL254W	YPL278C	Q08990	100 aa		4.24	□□□□□ -1.73
HFI1	YPL254W	AIM29	P36154	155 aa		4.24	□□□□□ -1.73
HFI1	YPL254W	TIM22	Q12328	207 aa		4.24	□□□□□ -1.73
HFI1	YPL254W	PAI3	P01094	68 aa		4.23	□□□□□ -1.73
HFI1	YPL254W	YPL073C	P40323	161 aa		4.23	□□□□□ -1.73
HFI1	YPL254W	AGE2	P40529	298 aa		4.23	□□□□□ -1.73
HFI1	YPL254W	ADH6	Q04894	360 aa	Known RBP	4.23	□□□□□ -1.73
HFI1	YPL254W	YOL085C	Q99345	113 aa		4.23	□□□□□ -1.73
HFI1	YPL254W	HMRA2	P0CY13	119 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	YKL044W	P36092	106 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	ECM33	P38248	429 aa	Known RBP	4.22	□□□□□ -1.73
HFI1	YPL254W	MST28	P39552	234 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	YEL067C	P39978	195 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	DIA1	P54005	336 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	MGR2	Q02889	113 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	YML079W	Q03629	201 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	YIL102C-A	Q2V2P5	75 aa		4.22	□□□□□ -1.73
HFI1	YPL254W	ADH1	P00330	348 aa	Known RBP	4.21	□□□□□ -1.74
HFI1	YPL254W	PHO85	P17157	305 aa		4.21	□□□□□ -1.74
HFI1	YPL254W	PFY1	P07274	126 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	YDL022C-A	P0C5L6	82 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	CPR1	P14832	162 aa	Known RBP	4.2	□□□□□ -1.74
HFI1	YPL254W	ANB1	P19211	157 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	SNF11	P38956	169 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	SPI1	P40092	148 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	POR2	P40478	281 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	YFR057W	P43625	151 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	SBH2	P52871	88 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	YGR219W	P53307	113 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	SUR7	P54003	302 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	ELC1	Q03071	99 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	FCF1	Q05498	189 aa	Predicted RBP	4.2	□□□□□ -1.74
HFI1	YPL254W	MSA1	Q08471	629 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	YPL261C	Q08976	102 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	YPR013C	Q12145	317 aa		4.2	□□□□□ -1.74
HFI1	YPL254W	VMA11	P32842	164 aa		4.19	□□□□□ -1.74
HFI1	YPL254W	KTI12	P34253	313 aa	Known RBP	4.19	□□□□□ -1.74
HFI1	YPL254W	YPL257W	Q08974	193 aa		4.19	□□□□□ -1.74
HFI1	YPL254W	COA3	Q3E7B2	85 aa		4.19	□□□□□ -1.74
HFI1	YPL254W	HYP2	P23301	157 aa	Known RBP	4.18	□□□□□ -1.74
HFI1	YPL254W	ARO2	P28777	376 aa	Known RBP	4.18	□□□□□ -1.74
HFI1	YPL254W	YKL070W	P36087	169 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	VTC1	P40046	129 aa	RIP-Chip data	4.18	□□□□□ -1.74	not detected
HFI1	YPL254W	YIR020C	P40575	100 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	SCW10	Q04951	389 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	SLO1	Q3E784	85 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	OXA1	P39952	402 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	YNR077C	P53758	84 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	YLR296W	Q05898	108 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	PRM7	Q12459	698 aa		4.18	□□□□□ -1.74
HFI1	YPL254W	MIC12	P38341	106 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms