RNA–Protein interactions for RNA: YPL111W

CAR1, Transcript of Arginase, catabolizes arginine to ornithine and urea, yeast

Gene CAR1, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAR1	YPL111W	YBL112C	Q3E7Y4	105 aa		4.01	□□□□□ -1.77
CAR1	YPL111W	YFR032C-B	Q8TGU2	87 aa		4.01	□□□□□ -1.77
CAR1	YPL111W	ADH1	P00330	348 aa	Known RBP	4	□□□□□ -1.77
CAR1	YPL111W	ADH3	P07246	375 aa	Known RBP	4	□□□□□ -1.77
CAR1	YPL111W	CSH1	P38287	376 aa		4	□□□□□ -1.77
CAR1	YPL111W	YDR115W	Q04598	105 aa		4	□□□□□ -1.77
CAR1	YPL111W	YMR253C	Q04835	414 aa		4	□□□□□ -1.77
CAR1	YPL111W	YOR385W	Q08909	290 aa		4	□□□□□ -1.77
CAR1	YPL111W	FEX1	Q08913	375 aa		4	□□□□□ -1.77
CAR1	YPL111W	FEX2	Q08991	375 aa		4	□□□□□ -1.77
CAR1	YPL111W	SMT3	Q12306	101 aa	Known RBP	4	□□□□□ -1.77
CAR1	YPL111W	SUS1	Q6WNK7	96 aa		4	□□□□□ -1.77
CAR1	YPL111W	YPR170W-B	P0C5R9	85 aa		3.99	□□□□□ -1.77
CAR1	YPL111W	RPB3	P16370	318 aa	Known RBP	3.99	□□□□□ -1.77
CAR1	YPL111W	BET1	P22804	142 aa		3.99	□□□□□ -1.77
CAR1	YPL111W	KRE9	P39005	276 aa		3.99	□□□□□ -1.77
CAR1	YPL111W	POR2	P40478	281 aa		3.99	□□□□□ -1.77
CAR1	YPL111W	EST3	Q03096	181 aa		3.99	□□□□□ -1.77
CAR1	YPL111W	ATG5	Q12380	294 aa		3.99	□□□□□ -1.77
CAR1	YPL111W	TIR1	P10863	254 aa		3.98	□□□□□ -1.77
CAR1	YPL111W	RNP1	P32385	249 aa		3.98	□□□□□ -1.77
CAR1	YPL111W	MSA2	P36157	363 aa		3.98	□□□□□ -1.77
CAR1	YPL111W	YGL118C	P53132	145 aa		3.98	□□□□□ -1.77
CAR1	YPL111W	YGR017W	P53210	297 aa		3.98	□□□□□ -1.77
CAR1	YPL111W	YMR244W	Q04018	355 aa		3.98	□□□□□ -1.77
CAR1	YPL111W	FMP49	A0A023PZB3	126 aa		3.97	□□□□□ -1.77
CAR1	YPL111W	URA5	P13298	226 aa	Known RBP	3.97	□□□□□ -1.77
CAR1	YPL111W	RRT1	P38192	103 aa		3.97	□□□□□ -1.77
CAR1	YPL111W	ASP1	P38986	381 aa	Predicted RBP	3.97	□□□□□ -1.77
CAR1	YPL111W	GVP36	P40531	326 aa	Known RBP	3.97	□□□□□ -1.77
CAR1	YPL111W	AIM11	P87275	137 aa		3.97	□□□□□ -1.77
CAR1	YPL111W	YLR412C-A	Q3E742	68 aa		3.97	□□□□□ -1.77
CAR1	YPL111W	YNL277W-A	Q3E7Z0	62 aa		3.97	□□□□□ -1.77
CAR1	YPL111W	YCL001W-B	Q96VH2	84 aa		3.97	□□□□□ -1.77
CAR1	YPL111W	ATP5	P09457	212 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	DDI2	P0CH63	225 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	DDI3	P0CH64	225 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	COS8	P38723	381 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	SNF11	P38956	169 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	SER2	P42941	309 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	GPI2	P46961	280 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	TMA23	Q03525	211 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	ZEO1	Q08245	113 aa		3.96	□□□□□ -1.78
CAR1	YPL111W	YLR156W	P0CE96	114 aa		3.95	□□□□□ -1.78
CAR1	YPL111W	YLR159W	P0CE97	114 aa		3.95	□□□□□ -1.78
CAR1	YPL111W	YLR161W	P0CE98	114 aa		3.95	□□□□□ -1.78
CAR1	YPL111W	SRP21	P32342	167 aa		3.95	□□□□□ -1.78
CAR1	YPL111W	YBL071C	P38185	102 aa		3.95	□□□□□ -1.78
CAR1	YPL111W	NSA2	P40078	261 aa	Known RBP	3.95	□□□□□ -1.78
CAR1	YPL111W	YER181C	P40097	107 aa		3.95	□□□□□ -1.78
CAR1	YPL111W	YJL027C	P47063	138 aa	Predicted RBP	3.95	□□□□□ -1.78
CAR1	YPL111W	FCF2	Q12035	217 aa	Predicted RBP	3.95	□□□□□ -1.78
CAR1	YPL111W	FPR2	P32472	135 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	SHB17	P36136	271 aa	Known RBP	3.94	□□□□□ -1.78
CAR1	YPL111W	ERV15	P38312	142 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	SNU13	P39990	126 aa	Known RBP	3.94	□□□□□ -1.78
CAR1	YPL111W	GAT4	P40569	121 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	IGD1	P43598	195 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	HAL1	Q01766	294 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	YOL014W	Q08110	124 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	YLR118C	Q12354	227 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	ISD11	Q6Q560	94 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	YML100W-A	Q8TGT0	57 aa		3.94	□□□□□ -1.78
CAR1	YPL111W	HPA3	P39979	161 aa		3.93	□□□□□ -1.78
CAR1	YPL111W	PRE5	P40302	234 aa	Known RBP	3.93	□□□□□ -1.78
CAR1	YPL111W	VAM10	Q08474	114 aa		3.93	□□□□□ -1.78
CAR1	YPL111W	DFM1	Q12743	341 aa	Known RBP	3.93	□□□□□ -1.78
CAR1	YPL111W	YBL081W	P38180	368 aa	Known RBP	3.92	□□□□□ -1.78
CAR1	YPL111W	YGL193C	P53097	103 aa		3.92	□□□□□ -1.78
CAR1	YPL111W	VPS28	Q02767	242 aa		3.92	□□□□□ -1.78
CAR1	YPL111W	YNL146C-A	Q3E7Z1	64 aa		3.92	□□□□□ -1.78
CAR1	YPL111W	YOR011W-A	Q3E807	68 aa		3.92	□□□□□ -1.78
CAR1	YPL111W	YHR213W	P0CI67	198 aa		3.91	□□□□□ -1.78
CAR1	YPL111W	MRP17	P28778	131 aa		3.91	□□□□□ -1.78
CAR1	YPL111W	MIG3	P39943	394 aa		3.91	□□□□□ -1.78
CAR1	YPL111W	YER134C	P40081	178 aa		3.91	□□□□□ -1.78
CAR1	YPL111W	SGF11	Q03067	99 aa		3.91	□□□□□ -1.78
CAR1	YPL111W	ECM19	Q06011	112 aa		3.91	□□□□□ -1.78
CAR1	YPL111W	FSF1	Q12029	327 aa	Known RBP	3.91	□□□□□ -1.78
CAR1	YPL111W	YHR140W	P38842	239 aa		3.9	□□□□□ -1.79
CAR1	YPL111W	YFL019C	P43576	117 aa		3.9	□□□□□ -1.79
CAR1	YPL111W	SFT1	P43682	97 aa		3.9	□□□□□ -1.79
CAR1	YPL111W	PRM7	Q12459	698 aa		3.9	□□□□□ -1.79
CAR1	YPL111W	KTI11	Q3E840	82 aa		3.9	□□□□□ -1.79
CAR1	YPL111W	ATP15	P21306	62 aa		3.89	□□□□□ -1.79
CAR1	YPL111W	SPT14	P32363	452 aa		3.89	□□□□□ -1.79
CAR1	YPL111W	YNL200C	P40165	246 aa	Known RBP	3.89	□□□□□ -1.79
CAR1	YPL111W	IMP2	P46972	177 aa		3.89	□□□□□ -1.79
CAR1	YPL111W	MRPS8	Q03799	155 aa		3.89	□□□□□ -1.79
CAR1	YPL111W	YPR063C	Q12160	140 aa		3.89	□□□□□ -1.79
CAR1	YPL111W	SPS2	P08459	502 aa		3.88	□□□□□ -1.79
CAR1	YPL111W	RRT13	P40042	185 aa		3.88	□□□□□ -1.79
CAR1	YPL111W	YER135C	P40082	130 aa		3.88	□□□□□ -1.79
CAR1	YPL111W	YGR025W	P53216	100 aa		3.88	□□□□□ -1.79
CAR1	YPL111W	NAT3	Q06504	195 aa		3.88	□□□□□ -1.79
CAR1	YPL111W	POC4	Q12245	148 aa	Predicted RBP	3.88	□□□□□ -1.79
CAR1	YPL111W	RPS11A	P0CX47	156 aa	Known RBP	3.87	□□□□□ -1.79
CAR1	YPL111W	RPS11B	P0CX48	156 aa	Known RBP	3.87	□□□□□ -1.79
CAR1	YPL111W	ANB1	P19211	157 aa		3.87	□□□□□ -1.79
CAR1	YPL111W	ARC15	P40518	154 aa	RIP-Chip data	3.87	□□□□□ -1.79	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 82.3 ms