RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeastyeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHL1YPL008W GPI19Q04082 140 aa3.17□□□□□ -1.9
CHL1YPL008W ARC18Q05933 178 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W PBP4Q07362 185 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W FSF1Q12029 327 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W YIR021W-AQ3E739 70 aa3.17□□□□□ -1.9
CHL1YPL008W FMP27Q06179 2628 aa3.17□□□□□ -1.9
CHL1YPL008W RPL23AP0CX41 137 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W RPL23BP0CX42 137 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W FZF1P32805 299 aa3.17□□□□□ -1.9
CHL1YPL008W YER188WP40103 239 aa3.17□□□□□ -1.9
CHL1YPL008W YIL012WP40551 113 aa3.17□□□□□ -1.9
CHL1YPL008W MRPL49P40858 161 aaPredicted RBP3.17□□□□□ -1.9
CHL1YPL008W THG1P53215 237 aaKnown RBP3.17□□□□□ -1.9
CHL1YPL008W ABF2Q02486 183 aa3.17□□□□□ -1.9
CHL1YPL008W AIM34Q03673 198 aa3.17□□□□□ -1.9
CHL1YPL008W YPL257WQ08974 193 aa3.17□□□□□ -1.9
CHL1YPL008W HAP3P13434 144 aa3.16□□□□□ -1.9
CHL1YPL008W YBR090CP38253 122 aa3.16□□□□□ -1.9
CHL1YPL008W YHR140WP38842 239 aa3.16□□□□□ -1.9
CHL1YPL008W CAB4P53332 305 aa3.16□□□□□ -1.9
CHL1YPL008W YMR317WQ04893 1140 aa3.16□□□□□ -1.9
CHL1YPL008W ATG39Q06159 398 aa3.16□□□□□ -1.9
CHL1YPL008W TMC1Q08422 150 aaPredicted RBP3.16□□□□□ -1.9
CHL1YPL008W VMA11P32842 164 aa3.16□□□□□ -1.9
CHL1YPL008W HAC1P41546 238 aa3.16□□□□□ -1.9
CHL1YPL008W BRP1P53194 125 aa3.16□□□□□ -1.9
CHL1YPL008W TIM22Q12328 207 aa3.16□□□□□ -1.9
CHL1YPL008W TOR1P35169 2470 aa3.16□□□□□ -1.9
CHL1YPL008W RPL15AP05748 204 aaKnown RBP3.15□□□□□ -1.9
CHL1YPL008W INO2P26798 304 aa3.15□□□□□ -1.9
CHL1YPL008W RPF1P38805 295 aaKnown RBP3.15□□□□□ -1.9
CHL1YPL008W SPI1P40092 148 aa3.15□□□□□ -1.9
CHL1YPL008W YGL230CP53074 147 aa3.15□□□□□ -1.9
CHL1YPL008W RPL15BP54780 204 aaPredicted RBP3.15□□□□□ -1.9
CHL1YPL008W YML079WQ03629 201 aa3.15□□□□□ -1.9
CHL1YPL008W TVP18Q04767 167 aa3.15□□□□□ -1.9
CHL1YPL008W FCY1Q12178 158 aa3.15□□□□□ -1.9
CHL1YPL008W PRE1P22141 198 aaKnown RBP3.15□□□□□ -1.91
CHL1YPL008W MST27P53176 234 aa3.15□□□□□ -1.91
CHL1YPL008W GRH1Q04410 372 aaKnown RBP3.15□□□□□ -1.91
CHL1YPL008W YCR023CP25351 611 aa3.14□□□□□ -1.91
CHL1YPL008W MSL1P40567 111 aaPredicted RBP3.14□□□□□ -1.91
CHL1YPL008W YJL028WP47062 111 aa3.14□□□□□ -1.91
CHL1YPL008W SPG4Q04438 115 aa3.14□□□□□ -1.91
CHL1YPL008W YDL157CQ12082 118 aa3.14□□□□□ -1.91
CHL1YPL008W YLR112WQ12130 139 aa3.14□□□□□ -1.91
CHL1YPL008W APS1P35181 156 aa3.14□□□□□ -1.91
CHL1YPL008W YPT53P36019 220 aa3.14□□□□□ -1.91
CHL1YPL008W YKL044WP36092 106 aa3.14□□□□□ -1.91
CHL1YPL008W YKR041WP36134 250 aa3.14□□□□□ -1.91
CHL1YPL008W MRPL24P36525 258 aaPredicted RBP3.14□□□□□ -1.91
CHL1YPL008W GLE2P40066 365 aa3.14□□□□□ -1.91
CHL1YPL008W HOR7Q05827 59 aa3.14□□□□□ -1.91
CHL1YPL008W CCW12Q12127 133 aa3.14□□□□□ -1.91
CHL1YPL008W Q0297Q9ZZV8 51 aa3.14□□□□□ -1.91
CHL1YPL008W MRP49P32388 137 aa3.13□□□□□ -1.91
CHL1YPL008W VPS55P47111 140 aa3.13□□□□□ -1.91
CHL1YPL008W POP3P53833 195 aaPredicted RBP3.13□□□□□ -1.91
CHL1YPL008W YDR042CQ03205 200 aa3.13□□□□□ -1.91
CHL1YPL008W NAT5Q08689 176 aa3.13□□□□□ -1.91
CHL1YPL008W PFY1P07274 126 aa3.13□□□□□ -1.91
CHL1YPL008W SEC11P15367 167 aa3.13□□□□□ -1.91
CHL1YPL008W KTI12P34253 313 aaKnown RBP3.13□□□□□ -1.91
CHL1YPL008W YER076CP40049 302 aa3.13□□□□□ -1.91
CHL1YPL008W YMR141CP40211 102 aa3.13□□□□□ -1.91
CHL1YPL008W KEG1P43614 200 aa3.13□□□□□ -1.91
CHL1YPL008W LCB3P47013 409 aa3.13□□□□□ -1.91
CHL1YPL008W MGR2Q02889 113 aa3.13□□□□□ -1.91
CHL1YPL008W BET5Q03630 159 aa3.13□□□□□ -1.91
CHL1YPL008W PKR1Q03880 122 aaKnown RBP3.13□□□□□ -1.91
CHL1YPL008W YOL160WQ08321 113 aa3.13□□□□□ -1.91
CHL1YPL008W IRC23Q08416 157 aa3.13□□□□□ -1.91
CHL1YPL008W PRM3Q08931 133 aa3.13□□□□□ -1.91
CHL1YPL008W YNL146C-AQ3E7Z1 64 aa3.13□□□□□ -1.91
CHL1YPL008W RPL42AP0CX27 106 aaKnown RBP3.12□□□□□ -1.91
CHL1YPL008W RPL42BP0CX28 106 aaKnown RBP3.12□□□□□ -1.91
CHL1YPL008W UTR5P32630 166 aa3.12□□□□□ -1.91
CHL1YPL008W YNL200CP40165 246 aaKnown RBP3.12□□□□□ -1.91
CHL1YPL008W TOS8P53147 276 aa3.12□□□□□ -1.91
CHL1YPL008W SRL1Q08673 210 aa3.12□□□□□ -1.91
CHL1YPL008W CUP1-1P0CX80 61 aa3.12□□□□□ -1.91
CHL1YPL008W CUP1-2P0CX81 61 aa3.12□□□□□ -1.91
CHL1YPL008W SNU13P39990 126 aaKnown RBP3.12□□□□□ -1.91
CHL1YPL008W TOS6P48560 102 aa3.12□□□□□ -1.91
CHL1YPL008W MMS2P53152 137 aa3.12□□□□□ -1.91
CHL1YPL008W RPL43AP0CX25 92 aaKnown RBP3.11□□□□□ -1.91
CHL1YPL008W RPL43BP0CX26 92 aa3.11□□□□□ -1.91
CHL1YPL008W HUA1P40325 198 aa3.11□□□□□ -1.91
CHL1YPL008W VPS71Q03433 280 aa3.11□□□□□ -1.91
CHL1YPL008W CSF1Q12150 2958 aa3.11□□□□□ -1.91
CHL1YPL008W RPB9P27999 122 aa3.11□□□□□ -1.91
CHL1YPL008W PRY2P36110 329 aa3.11□□□□□ -1.91
CHL1YPL008W YDR366CP87287 132 aa3.11□□□□□ -1.91
CHL1YPL008W FCF1Q05498 189 aaPredicted RBP3.11□□□□□ -1.91
CHL1YPL008W YPR014CQ6B0W2 109 aa3.11□□□□□ -1.91
CHL1YPL008W YHR022CP38763 256 aa3.1□□□□□ -1.91
CHL1YPL008W YIL014C-AQ02598 104 aa3.1□□□□□ -1.91
CHL1YPL008W YMR320WQ04897 101 aa3.1□□□□□ -1.91
CHL1YPL008W YLR363W-AQ3E747 85 aa3.1□□□□□ -1.91
CHL1YPL008W VAR1P02381 398 aa3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms