RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C RDL1Q12305 139 aaKnown RBP5.92□□□□□ -1.46
RUP1YOR138C YIL102C-AQ2V2P5 75 aa5.92□□□□□ -1.46
RUP1YOR138C ARO2P28777 376 aaKnown RBP5.91□□□□□ -1.46
RUP1YOR138C MST28P39552 234 aa5.91□□□□□ -1.46
RUP1YOR138C YER076CP40049 302 aa5.91□□□□□ -1.46
RUP1YOR138C MOT3P54785 490 aaKnown RBP5.91□□□□□ -1.46
RUP1YOR138C ELC1Q03071 99 aa5.91□□□□□ -1.46
RUP1YOR138C DFM1Q12743 341 aaKnown RBP5.91□□□□□ -1.46
RUP1YOR138C SLO1Q3E784 85 aa5.91□□□□□ -1.46
RUP1YOR138C ADH1P00330 348 aaKnown RBP5.91□□□□□ -1.46
RUP1YOR138C HYP2P23301 157 aaKnown RBP5.91□□□□□ -1.46
RUP1YOR138C PCL2P25693 308 aa5.91□□□□□ -1.46
RUP1YOR138C CMC1P36064 111 aa5.91□□□□□ -1.46
RUP1YOR138C YOL160WQ08321 113 aa5.91□□□□□ -1.46
RUP1YOR138C GEP3Q08622 556 aa5.91□□□□□ -1.46
RUP1YOR138C AQY1P0CD91 305 aa5.9□□□□□ -1.47
RUP1YOR138C PHO85P17157 305 aa5.9□□□□□ -1.47
RUP1YOR138C ECM33P38248 429 aaKnown RBP5.9□□□□□ -1.47
RUP1YOR138C SUR7P54003 302 aa5.9□□□□□ -1.47
RUP1YOR138C HMRA2P0CY13 119 aa5.89□□□□□ -1.47
RUP1YOR138C SPS100P13130 326 aa5.89□□□□□ -1.47
RUP1YOR138C CPR1P14832 162 aaKnown RBP5.89□□□□□ -1.47
RUP1YOR138C CDC43P18898 376 aa5.89□□□□□ -1.47
RUP1YOR138C YMR181CQ03231 154 aa5.89□□□□□ -1.47
RUP1YOR138C YHL044WP38727 235 aa5.88□□□□□ -1.47
RUP1YOR138C POR2P40478 281 aa5.88□□□□□ -1.47
RUP1YOR138C LCB3P47013 409 aa5.88□□□□□ -1.47
RUP1YOR138C YGR025WP53216 100 aa5.88□□□□□ -1.47
RUP1YOR138C MGR2Q02889 113 aa5.88□□□□□ -1.47
RUP1YOR138C YPL261CQ08976 102 aa5.88□□□□□ -1.47
RUP1YOR138C PFY1P07274 126 aa5.87□□□□□ -1.47
RUP1YOR138C YLR112WQ12130 139 aa5.87□□□□□ -1.47
RUP1YOR138C KTI12P34253 313 aaKnown RBP5.87□□□□□ -1.47
RUP1YOR138C RPL32P38061 130 aaKnown RBP5.86□□□□□ -1.47
RUP1YOR138C SNF11P38956 169 aa5.86□□□□□ -1.47
RUP1YOR138C FCF1Q05498 189 aaPredicted RBP5.86□□□□□ -1.47
RUP1YOR138C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
RUP1YOR138C YKL070WP36087 169 aa5.85□□□□□ -1.47
RUP1YOR138C DUO1P53168 247 aaKnown RBP5.85□□□□□ -1.47
RUP1YOR138C YLR296WQ05898 108 aa5.85□□□□□ -1.47
RUP1YOR138C YPL278CQ08990 100 aa5.85□□□□□ -1.47
RUP1YOR138C YFR057WP43625 151 aa5.84□□□□□ -1.47
RUP1YOR138C SBH2P52871 88 aa5.84□□□□□ -1.47
RUP1YOR138C TMC1Q08422 150 aaPredicted RBP5.84□□□□□ -1.47
RUP1YOR138C POP7P38291 140 aa5.84□□□□□ -1.48
RUP1YOR138C OXA1P39952 402 aa5.84□□□□□ -1.48
RUP1YOR138C YER181CP40097 107 aa5.84□□□□□ -1.48
RUP1YOR138C CIN5P40917 295 aa5.84□□□□□ -1.48
RUP1YOR138C GLO1P50107 326 aa5.84□□□□□ -1.48
RUP1YOR138C SCW10Q04951 389 aa5.84□□□□□ -1.48
RUP1YOR138C COA3Q3E7B2 85 aa5.84□□□□□ -1.48
RUP1YOR138C YOL085CQ99345 113 aa5.84□□□□□ -1.48
RUP1YOR138C MLF3P32047 452 aa5.83□□□□□ -1.48
RUP1YOR138C AGA1P32323 725 aa5.83□□□□□ -1.48
RUP1YOR138C YEL067CP39978 195 aa5.83□□□□□ -1.48
RUP1YOR138C VHS2P40463 436 aa5.83□□□□□ -1.48
RUP1YOR138C MRPL49P40858 161 aaPredicted RBP5.83□□□□□ -1.48
RUP1YOR138C YGR219WP53307 113 aa5.83□□□□□ -1.48
RUP1YOR138C TIM10P87108 93 aa5.83□□□□□ -1.48
RUP1YOR138C MSA1Q08471 629 aa5.83□□□□□ -1.48
RUP1YOR138C YKL023C-AQ2V2P3 75 aa5.83□□□□□ -1.48
RUP1YOR138C YKR041WP36134 250 aa5.82□□□□□ -1.48
RUP1YOR138C TOS6P48560 102 aa5.82□□□□□ -1.48
RUP1YOR138C YDL022C-AP0C5L6 82 aa5.82□□□□□ -1.48
RUP1YOR138C MSN1P22148 382 aa5.82□□□□□ -1.48
RUP1YOR138C YPT53P36019 220 aa5.82□□□□□ -1.48
RUP1YOR138C AIM34Q03673 198 aa5.81□□□□□ -1.48
RUP1YOR138C YNR077CP53758 84 aa5.81□□□□□ -1.48
RUP1YOR138C MET32Q12041 191 aa5.81□□□□□ -1.48
RUP1YOR138C YOR008C-AQ3E7B9 74 aa5.81□□□□□ -1.48
RUP1YOR138C CYC7P00045 113 aa5.8□□□□□ -1.48
RUP1YOR138C VAR1P02381 398 aa5.8□□□□□ -1.48
RUP1YOR138C NHP2P32495 156 aaPredicted RBP5.8□□□□□ -1.48
RUP1YOR138C SPI1P40092 148 aa5.8□□□□□ -1.48
RUP1YOR138C KEG1P43614 200 aa5.8□□□□□ -1.48
RUP1YOR138C NCE103P53615 221 aa5.8□□□□□ -1.48
RUP1YOR138C YIR020CP40575 100 aa5.79□□□□□ -1.48
RUP1YOR138C AIM11P87275 137 aa5.79□□□□□ -1.48
RUP1YOR138C YML122CQ03207 126 aa5.79□□□□□ -1.48
RUP1YOR138C PRM7Q12459 698 aa5.79□□□□□ -1.48
RUP1YOR138C YOR011W-AQ3E807 68 aa5.79□□□□□ -1.48
RUP1YOR138C TRA1P38811 3744 aa5.79□□□□□ -1.48
RUP1YOR138C RPL42AP0CX27 106 aaKnown RBP5.79□□□□□ -1.48
RUP1YOR138C RPL42BP0CX28 106 aaKnown RBP5.79□□□□□ -1.48
RUP1YOR138C MIC12P38341 106 aa5.79□□□□□ -1.48
RUP1YOR138C VTC1P40046 129 aaRIP-Chip data5.79□□□□□ -1.48not detected
RUP1YOR138C URM1P40554 99 aaPredicted RBP5.79□□□□□ -1.48
RUP1YOR138C YOR097CQ12274 175 aaPredicted RBP5.79□□□□□ -1.48
RUP1YOR138C BPH1P25356 2167 aa5.78□□□□□ -1.48
RUP1YOR138C VMA11P32842 164 aa5.78□□□□□ -1.48
RUP1YOR138C YHR022CP38763 256 aa5.78□□□□□ -1.48
RUP1YOR138C BNA1P47096 177 aa5.78□□□□□ -1.48
RUP1YOR138C YPR053CQ6Q5F3 151 aa5.78□□□□□ -1.48
RUP1YOR138C IGO2Q9P305 131 aa5.78□□□□□ -1.48
RUP1YOR138C ATP15P21306 62 aa5.77□□□□□ -1.49
RUP1YOR138C ATX1P38636 73 aa5.77□□□□□ -1.49
RUP1YOR138C DCV1P43595 202 aa5.77□□□□□ -1.49
RUP1YOR138C YER085CP40058 173 aa5.77□□□□□ -1.49
RUP1YOR138C TOS8P53147 276 aa5.77□□□□□ -1.49
RUP1YOR138C YPR013CQ12145 317 aa5.76□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms