RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YIL002W-A	Q3E7Z5	69 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	YIL134C-A	Q45U18	67 aa		2.65	□□□□□ -1.99
TPM1	YNL079C	MRPL11	P36521	249 aa	Predicted RBP	2.64	□□□□□ -1.99
TPM1	YNL079C	PRS4	P38063	326 aa	Predicted RBP	2.64	□□□□□ -1.99
TPM1	YNL079C	SNU13	P39990	126 aa	Known RBP	2.64	□□□□□ -1.99
TPM1	YNL079C	RRT13	P40042	185 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	POR2	P40478	281 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	YFR045W	P43617	309 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	RPA43	P46669	326 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	TDA4	P47153	279 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	DAD4	P69851	72 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	UBC7	Q02159	165 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	DAD1	Q12248	94 aa		2.64	□□□□□ -1.99
TPM1	YNL079C	SEC4	P07560	215 aa	Known RBP	2.63	□□□□□ -1.99
TPM1	YNL079C	RPL18A	P0CX49	186 aa	Known RBP	2.63	□□□□□ -1.99
TPM1	YNL079C	RPL18B	P0CX50	186 aa	Known RBP	2.63	□□□□□ -1.99
TPM1	YNL079C	FUN14	P18411	198 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	INO2	P26798	304 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	SCM4	P32564	187 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	ZRT1	P32804	376 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	MIC12	P38341	106 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	PAU7	P39545	55 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	YER134C	P40081	178 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	YMR141C	P40211	102 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	SDS23	P53172	527 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	CAB4	P53332	305 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	POM33	Q12164	279 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	UTP23	Q12339	254 aa	Known RBP	2.63	□□□□□ -1.99
TPM1	YNL079C	YLR342W-A	Q3E810	57 aa		2.63	□□□□□ -1.99
TPM1	YNL079C	NUM1	Q00402	2748 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	CUP1-1	P0CX80	61 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	CUP1-2	P0CX81	61 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	MRPL44	P19956	98 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	YKL102C	P34249	101 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	PAU16	P35994	123 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	SNF11	P38956	169 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	TEM1	P38987	245 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	SEC72	P39742	193 aa	Known RBP	2.62	□□□□□ -1.99
TPM1	YNL079C	CDC40	P40968	455 aa	Predicted RBP	2.62	□□□□□ -1.99
TPM1	YNL079C	YGL118C	P53132	145 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	THG1	P53215	237 aa	Known RBP	2.62	□□□□□ -1.99
TPM1	YNL079C	SPG4	Q04438	115 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	ARC18	Q05933	178 aa	Known RBP	2.62	□□□□□ -1.99
TPM1	YNL079C	YOL160W	Q08321	113 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	CSM4	Q08955	156 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	FSF1	Q12029	327 aa	Known RBP	2.62	□□□□□ -1.99
TPM1	YNL079C	YAL067W-A	Q8TGK6	75 aa		2.62	□□□□□ -1.99
TPM1	YNL079C	STF1	P01098	86 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	CPT1	P17898	393 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	RPB9	P27999	122 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	GSP1	P32835	219 aa	Known RBP	2.61	□□□□□ -1.99
TPM1	YNL079C	GSP2	P32836	220 aa	Known RBP	2.61	□□□□□ -1.99
TPM1	YNL079C	YNL194C	P40169	301 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	YJL028W	P47062	111 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	VPS55	P47111	140 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	TOS8	P53147	276 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	BRP1	P53194	125 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	UPS3	Q04006	179 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	GTO3	Q04806	366 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	HOR7	Q05827	59 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	FYV7	Q12247	151 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	WIP1	Q2V2P8	89 aa		2.61	□□□□□ -1.99
TPM1	YNL079C	RPL27A	P0C2H6	136 aa	Known RBP	2.6	□□□□□ -1.99
TPM1	YNL079C	KTI12	P34253	313 aa	Known RBP	2.6	□□□□□ -1.99
TPM1	YNL079C	POP7	P38291	140 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	SPI1	P40092	148 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	YER188W	P40103	239 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	YNL200C	P40165	246 aa	Known RBP	2.6	□□□□□ -1.99
TPM1	YNL079C	AGE2	P40529	298 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	COX16	P47081	118 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	GPI19	Q04082	140 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	ATG39	Q06159	398 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	CNL1	Q06333	122 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	YPR013C	Q12145	317 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	TIM22	Q12328	207 aa		2.6	□□□□□ -1.99
TPM1	YNL079C	ATP5	P09457	212 aa		2.59	□□□□□ -1.99
TPM1	YNL079C	YHR140W	P38842	239 aa		2.59	□□□□□ -1.99
TPM1	YNL079C	YGR017W	P53210	297 aa		2.59	□□□□□ -1.99
TPM1	YNL079C	YGR025W	P53216	100 aa		2.59	□□□□□ -1.99
TPM1	YNL079C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.59	□□□□□ -1.99
TPM1	YNL079C	YKR032W	P36127	104 aa		2.58	□□□□□ -2
TPM1	YNL079C	YHR022C	P38763	256 aa		2.58	□□□□□ -2
TPM1	YNL079C	PET8	P38921	284 aa		2.58	□□□□□ -2
TPM1	YNL079C	CIN5	P40917	295 aa		2.58	□□□□□ -2
TPM1	YNL079C	CAX4	P53223	239 aa		2.58	□□□□□ -2
TPM1	YNL079C	YIP3	P53633	176 aa		2.58	□□□□□ -2
TPM1	YNL079C	POP3	P53833	195 aa	Predicted RBP	2.58	□□□□□ -2
TPM1	YNL079C	DIA1	P54005	336 aa		2.58	□□□□□ -2
TPM1	YNL079C	SAE3	P89114	91 aa		2.58	□□□□□ -2
TPM1	YNL079C	PKR1	Q03880	122 aa	Known RBP	2.58	□□□□□ -2
TPM1	YNL079C	NAT5	Q08689	176 aa		2.58	□□□□□ -2
TPM1	YNL079C	YPL162C	Q12042	273 aa		2.58	□□□□□ -2
TPM1	YNL079C	PRM7	Q12459	698 aa		2.58	□□□□□ -2
TPM1	YNL079C	YNL146C-A	Q3E7Z1	64 aa		2.58	□□□□□ -2
TPM1	YNL079C	HTL1	Q9URQ5	78 aa		2.58	□□□□□ -2
TPM1	YNL079C	BPH1	P25356	2167 aa		2.57	□□□□□ -2
TPM1	YNL079C	SEC11	P15367	167 aa		2.57	□□□□□ -2
TPM1	YNL079C	MRPL49	P40858	161 aa	Predicted RBP	2.57	□□□□□ -2
TPM1	YNL079C	YGL230C	P53074	147 aa		2.57	□□□□□ -2
TPM1	YNL079C	YIL014C-A	Q02598	104 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms