RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W MRPL23Q12487 163 aaPredicted RBP1.43□□□□□ -2.18
RTP1YMR185W DFM1Q12743 341 aaKnown RBP1.43□□□□□ -2.18
RTP1YMR185W YOS1Q3E834 85 aa1.43□□□□□ -2.18
RTP1YMR185W TIR2P33890 251 aa1.43□□□□□ -2.18
RTP1YMR185W YKR045CP36138 183 aa1.43□□□□□ -2.18
RTP1YMR185W ADH5P38113 351 aaKnown RBP1.43□□□□□ -2.18
RTP1YMR185W ATX1P38636 73 aa1.43□□□□□ -2.18
RTP1YMR185W MBB1P39534 108 aa1.43□□□□□ -2.18
RTP1YMR185W PIR5P46999 287 aa1.43□□□□□ -2.18
RTP1YMR185W MOT3P54785 490 aaKnown RBP1.43□□□□□ -2.18
RTP1YMR185W YOR097CQ12274 175 aaPredicted RBP1.43□□□□□ -2.18
RTP1YMR185W COA3Q3E7B2 85 aa1.43□□□□□ -2.18
RTP1YMR185W IGO2Q9P305 131 aa1.43□□□□□ -2.18
RTP1YMR185W LDB16P25587 256 aa1.43□□□□□ -2.18
RTP1YMR185W NHP2P32495 156 aaPredicted RBP1.43□□□□□ -2.18
RTP1YMR185W YFL015CP43578 164 aa1.43□□□□□ -2.18
RTP1YMR185W OST2P46964 130 aa1.43□□□□□ -2.18
RTP1YMR185W DUO1P53168 247 aaKnown RBP1.43□□□□□ -2.18
RTP1YMR185W MST27P53176 234 aa1.43□□□□□ -2.18
RTP1YMR185W YNL092WP53934 400 aa1.43□□□□□ -2.18
RTP1YMR185W COX12Q01519 83 aa1.43□□□□□ -2.18
RTP1YMR185W LSM6Q06406 86 aaKnown RBP1.43□□□□□ -2.18
RTP1YMR185W IRC25Q07951 179 aa1.43□□□□□ -2.18
RTP1YMR185W TIM22Q12328 207 aa1.43□□□□□ -2.18
RTP1YMR185W YCR085WP25650 117 aa1.42□□□□□ -2.18
RTP1YMR185W PCL2P25693 308 aa1.42□□□□□ -2.18
RTP1YMR185W YMR141CP40211 102 aa1.42□□□□□ -2.18
RTP1YMR185W YGR219WP53307 113 aa1.42□□□□□ -2.18
RTP1YMR185W YNR077CP53758 84 aa1.42□□□□□ -2.18
RTP1YMR185W MSA1Q08471 629 aa1.42□□□□□ -2.18
RTP1YMR185W RPL32P38061 130 aaKnown RBP1.42□□□□□ -2.18
RTP1YMR185W MIC12P38341 106 aa1.42□□□□□ -2.18
RTP1YMR185W YEL067CP39978 195 aa1.42□□□□□ -2.18
RTP1YMR185W SGN1P40561 250 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
RTP1YMR185W HPA2Q06592 156 aa1.42□□□□□ -2.18
RTP1YMR185W YOR029WQ12243 111 aa1.42□□□□□ -2.18
RTP1YMR185W YCR075W-AQ3E830 75 aa1.42□□□□□ -2.18
RTP1YMR185W ISD11Q6Q560 94 aa1.42□□□□□ -2.18
RTP1YMR185W FAB1P34756 2278 aa1.41□□□□□ -2.18
RTP1YMR185W RPL42AP0CX27 106 aaKnown RBP1.41□□□□□ -2.18
RTP1YMR185W RPL42BP0CX28 106 aaKnown RBP1.41□□□□□ -2.18
RTP1YMR185W RPS8AP0CX39 200 aaKnown RBP1.41□□□□□ -2.18
RTP1YMR185W RPS8BP0CX40 200 aaKnown RBP1.41□□□□□ -2.18
RTP1YMR185W AGA1P32323 725 aa1.41□□□□□ -2.18
RTP1YMR185W IES6P32617 166 aa1.41□□□□□ -2.18
RTP1YMR185W MRPL49P40858 161 aaPredicted RBP1.41□□□□□ -2.18
RTP1YMR185W BNA1P47096 177 aa1.41□□□□□ -2.18
RTP1YMR185W DIA1P54005 336 aa1.41□□□□□ -2.18
RTP1YMR185W YDR114CQ04597 100 aa1.41□□□□□ -2.18
RTP1YMR185W YPL261CQ08976 102 aa1.41□□□□□ -2.18
RTP1YMR185W CCW12Q12127 133 aa1.41□□□□□ -2.18
RTP1YMR185W FOL3Q12676 427 aaPredicted RBP1.41□□□□□ -2.18
RTP1YMR185W YIR021W-AQ3E739 70 aa1.41□□□□□ -2.18
RTP1YMR185W VAR1P02381 398 aa1.41□□□□□ -2.18
RTP1YMR185W RPA12P32529 125 aaKnown RBP1.41□□□□□ -2.18
RTP1YMR185W BRR2P32639 2163 aaKnown RBP1.41□□□□□ -2.18
RTP1YMR185W OXA1P39952 402 aa1.41□□□□□ -2.18
RTP1YMR185W YNL194CP40169 301 aa1.41□□□□□ -2.18
RTP1YMR185W HUA1P40325 198 aa1.41□□□□□ -2.18
RTP1YMR185W YFL051CP43552 160 aa1.41□□□□□ -2.18
RTP1YMR185W UBC7Q02159 165 aa1.41□□□□□ -2.18
RTP1YMR185W YOR008C-AQ3E7B9 74 aa1.41□□□□□ -2.18
RTP1YMR185W YFL041W-AQ3E817 63 aa1.41□□□□□ -2.18
RTP1YMR185W Q0255P03881 472 aa1.4□□□□□ -2.18
RTP1YMR185W RPL39P04650 51 aa1.4□□□□□ -2.18
RTP1YMR185W HMRA2P0CY13 119 aa1.4□□□□□ -2.18
RTP1YMR185W INO4P13902 151 aa1.4□□□□□ -2.18
RTP1YMR185W KTI12P34253 313 aaKnown RBP1.4□□□□□ -2.18
RTP1YMR185W POR2P40478 281 aa1.4□□□□□ -2.18
RTP1YMR185W YFL065CP43539 102 aa1.4□□□□□ -2.18
RTP1YMR185W MRPS12P53732 153 aa1.4□□□□□ -2.18
RTP1YMR185W AIM11P87275 137 aa1.4□□□□□ -2.18
RTP1YMR185W SED1Q01589 338 aa1.4□□□□□ -2.18
RTP1YMR185W YLR194CQ05777 254 aa1.4□□□□□ -2.18
RTP1YMR185W YPR203WQ08994 102 aa1.4□□□□□ -2.18
RTP1YMR185W YOR304C-AO14468 76 aa1.4□□□□□ -2.19
RTP1YMR185W TRP1P00912 224 aa1.4□□□□□ -2.19
RTP1YMR185W YDL022C-AP0C5L6 82 aa1.4□□□□□ -2.19
RTP1YMR185W MRPL38P35996 138 aaPredicted RBP1.4□□□□□ -2.19
RTP1YMR185W PEX17P40155 199 aa1.4□□□□□ -2.19
RTP1YMR185W BLM10P43583 2143 aa1.4□□□□□ -2.19
RTP1YMR185W YDL186WP48568 277 aa1.4□□□□□ -2.19
RTP1YMR185W YPL080CQ02826 108 aa1.4□□□□□ -2.19
RTP1YMR185W AIM34Q03673 198 aa1.4□□□□□ -2.19
RTP1YMR185W YOL160WQ08321 113 aa1.4□□□□□ -2.19
RTP1YMR185W IRC23Q08416 157 aa1.4□□□□□ -2.19
RTP1YMR185W RNH203Q12338 110 aa1.4□□□□□ -2.19
RTP1YMR185W JID1Q12350 301 aa1.4□□□□□ -2.19
RTP1YMR185W PHO85P17157 305 aa1.39□□□□□ -2.19
RTP1YMR185W YJR146WP47174 117 aa1.39□□□□□ -2.19
RTP1YMR185W ATP23P53722 227 aa1.39□□□□□ -2.19
RTP1YMR185W EOS1P53938 366 aa1.39□□□□□ -2.19
RTP1YMR185W RPL15BP54780 204 aaPredicted RBP1.39□□□□□ -2.19
RTP1YMR185W YMR317WQ04893 1140 aa1.39□□□□□ -2.19
RTP1YMR185W RRG8Q06109 277 aa1.39□□□□□ -2.19
RTP1YMR185W SHH4Q06236 168 aa1.39□□□□□ -2.19
RTP1YMR185W FCY1Q12178 158 aa1.39□□□□□ -2.19
RTP1YMR185W YAL063C-AQ3E791 96 aa1.39□□□□□ -2.19
RTP1YMR185W YHR130CP38834 111 aa1.39□□□□□ -2.19
RTP1YMR185W YAR1P46683 200 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms