RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C BET5Q03630 159 aa3.62□□□□□ -1.83
EAR1YMR171C IRC25Q07951 179 aa3.62□□□□□ -1.83
EAR1YMR171C YOR029WQ12243 111 aa3.62□□□□□ -1.83
EAR1YMR171C UTP23Q12339 254 aaKnown RBP3.62□□□□□ -1.83
EAR1YMR171C MBF1O14467 151 aaKnown RBP3.62□□□□□ -1.83
EAR1YMR171C RPL27AP0C2H6 136 aaKnown RBP3.62□□□□□ -1.83
EAR1YMR171C YER121WP40076 114 aa3.62□□□□□ -1.83
EAR1YMR171C AGE2P40529 298 aa3.62□□□□□ -1.83
EAR1YMR171C YGR017WP53210 297 aa3.62□□□□□ -1.83
EAR1YMR171C SWT21P53873 357 aaPredicted RBP3.62□□□□□ -1.83
EAR1YMR171C YPL257WQ08974 193 aa3.62□□□□□ -1.83
EAR1YMR171C RPL27BP0C2H7 136 aaKnown RBP3.61□□□□□ -1.83
EAR1YMR171C YKL044WP36092 106 aa3.61□□□□□ -1.83
EAR1YMR171C CIN5P40917 295 aa3.61□□□□□ -1.83
EAR1YMR171C MST27P53176 234 aa3.61□□□□□ -1.83
EAR1YMR171C SED1Q01589 338 aa3.61□□□□□ -1.83
EAR1YMR171C YTH1Q06102 208 aaPredicted RBP3.61□□□□□ -1.83
EAR1YMR171C YLR342W-AQ3E810 57 aa3.61□□□□□ -1.83
EAR1YMR171C YCL021W-AQ96VH3 125 aa3.61□□□□□ -1.83
EAR1YMR171C IRA1P18963 3092 aa3.6□□□□□ -1.83
EAR1YMR171C YCR023CP25351 611 aa3.6□□□□□ -1.83
EAR1YMR171C ADH5P38113 351 aaKnown RBP3.6□□□□□ -1.83
EAR1YMR171C POP7P38291 140 aa3.6□□□□□ -1.83
EAR1YMR171C YFL051CP43552 160 aa3.6□□□□□ -1.83
EAR1YMR171C NCA3P46955 337 aa3.6□□□□□ -1.83
EAR1YMR171C SUR7P54003 302 aa3.6□□□□□ -1.83
EAR1YMR171C UBC7Q02159 165 aa3.6□□□□□ -1.83
EAR1YMR171C GPI19Q04082 140 aa3.6□□□□□ -1.83
EAR1YMR171C ADH6Q04894 360 aaKnown RBP3.6□□□□□ -1.83
EAR1YMR171C JID1Q12350 301 aa3.6□□□□□ -1.83
EAR1YMR171C YHR213WP0CI67 198 aa3.59□□□□□ -1.83
EAR1YMR171C CPT1P17898 393 aa3.59□□□□□ -1.83
EAR1YMR171C ARO2P28777 376 aaKnown RBP3.59□□□□□ -1.83
EAR1YMR171C GPI18P38211 433 aa3.59□□□□□ -1.83
EAR1YMR171C YHL037CP38733 133 aa3.59□□□□□ -1.83
EAR1YMR171C CTR2P38865 189 aa3.59□□□□□ -1.83
EAR1YMR171C YMR141CP40211 102 aa3.59□□□□□ -1.83
EAR1YMR171C IMP2P46972 177 aa3.59□□□□□ -1.83
EAR1YMR171C YDR042CQ03205 200 aa3.59□□□□□ -1.83
EAR1YMR171C MIX17Q03667 156 aa3.59□□□□□ -1.83
EAR1YMR171C YIL102C-AQ2V2P5 75 aa3.59□□□□□ -1.83
EAR1YMR171C IES6P32617 166 aa3.59□□□□□ -1.84
EAR1YMR171C YIL012WP40551 113 aa3.59□□□□□ -1.84
EAR1YMR171C YIL014C-AQ02598 104 aa3.59□□□□□ -1.84
EAR1YMR171C ATG39Q06159 398 aa3.59□□□□□ -1.84
EAR1YMR171C DAL80P26343 269 aa3.58□□□□□ -1.84
EAR1YMR171C YKR045CP36138 183 aa3.58□□□□□ -1.84
EAR1YMR171C ECM14P38836 430 aa3.58□□□□□ -1.84
EAR1YMR171C YHR140WP38842 239 aa3.58□□□□□ -1.84
EAR1YMR171C YPL073CP40323 161 aa3.58□□□□□ -1.84
EAR1YMR171C YMR181CQ03231 154 aa3.58□□□□□ -1.84
EAR1YMR171C SLO1Q3E784 85 aa3.58□□□□□ -1.84
EAR1YMR171C YER078W-AQ3E7A2 54 aa3.58□□□□□ -1.84
EAR1YMR171C PHO85P17157 305 aa3.57□□□□□ -1.84
EAR1YMR171C HYP2P23301 157 aaKnown RBP3.57□□□□□ -1.84
EAR1YMR171C MRPL38P35996 138 aaPredicted RBP3.57□□□□□ -1.84
EAR1YMR171C YKR032WP36127 104 aa3.57□□□□□ -1.84
EAR1YMR171C ECM33P38248 429 aaKnown RBP3.57□□□□□ -1.84
EAR1YMR171C YHL044WP38727 235 aa3.57□□□□□ -1.84
EAR1YMR171C PET8P38921 284 aa3.57□□□□□ -1.84
EAR1YMR171C YNL198CP40166 100 aa3.57□□□□□ -1.84
EAR1YMR171C ELC1Q03071 99 aa3.57□□□□□ -1.84
EAR1YMR171C YMR103CQ04436 120 aa3.57□□□□□ -1.84
EAR1YMR171C TIM22Q12328 207 aa3.57□□□□□ -1.84
EAR1YMR171C YKL023C-AQ2V2P3 75 aa3.57□□□□□ -1.84
EAR1YMR171C YER076CP40049 302 aa3.56□□□□□ -1.84
EAR1YMR171C YFL067WP43537 175 aa3.56□□□□□ -1.84
EAR1YMR171C YJL027CP47063 138 aaPredicted RBP3.56□□□□□ -1.84
EAR1YMR171C DIA1P54005 336 aa3.56□□□□□ -1.84
EAR1YMR171C MGR2Q02889 113 aa3.56□□□□□ -1.84
EAR1YMR171C YLR296WQ05898 108 aa3.56□□□□□ -1.84
EAR1YMR171C ADH1P00330 348 aaKnown RBP3.55□□□□□ -1.84
EAR1YMR171C PFY1P07274 126 aa3.55□□□□□ -1.84
EAR1YMR171C POR2P40478 281 aa3.55□□□□□ -1.84
EAR1YMR171C YCL048W-AQ2V2Q2 79 aa3.55□□□□□ -1.84
EAR1YMR171C SNU13P39990 126 aaKnown RBP3.55□□□□□ -1.84
EAR1YMR171C YER181CP40097 107 aa3.55□□□□□ -1.84
EAR1YMR171C FCF1Q05498 189 aaPredicted RBP3.55□□□□□ -1.84
EAR1YMR171C DGA1Q08650 418 aa3.55□□□□□ -1.84
EAR1YMR171C PBP4Q07362 185 aaKnown RBP3.54□□□□□ -1.84
EAR1YMR171C IRC23Q08416 157 aa3.54□□□□□ -1.84
EAR1YMR171C BPH1P25356 2167 aa3.53□□□□□ -1.84
EAR1YMR171C HMRA2P0CY13 119 aa3.53□□□□□ -1.84
EAR1YMR171C KTI12P34253 313 aaKnown RBP3.53□□□□□ -1.84
EAR1YMR171C YKR041WP36134 250 aa3.53□□□□□ -1.84
EAR1YMR171C GLE2P40066 365 aa3.53□□□□□ -1.84
EAR1YMR171C WWM1P43582 211 aaKnown RBP3.53□□□□□ -1.84
EAR1YMR171C TOS6P48560 102 aa3.53□□□□□ -1.84
EAR1YMR171C FCY1Q12178 158 aa3.53□□□□□ -1.84
EAR1YMR171C YKL070WP36087 169 aa3.52□□□□□ -1.85
EAR1YMR171C SNF11P38956 169 aa3.52□□□□□ -1.85
EAR1YMR171C YGR219WP53307 113 aa3.52□□□□□ -1.85
EAR1YMR171C SCW10Q04951 389 aa3.52□□□□□ -1.85
EAR1YMR171C YPL261CQ08976 102 aa3.52□□□□□ -1.85
EAR1YMR171C YPL278CQ08990 100 aa3.52□□□□□ -1.85
EAR1YMR171C YNL217WP40152 326 aa3.52□□□□□ -1.85
EAR1YMR171C SIM1P40472 476 aa3.52□□□□□ -1.85
EAR1YMR171C SBH2P52871 88 aa3.52□□□□□ -1.85
EAR1YMR171C YOL160WQ08321 113 aa3.52□□□□□ -1.85
EAR1YMR171C NHP2P32495 156 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms