RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A YPR053CQ6Q5F3 151 aa9.5□□□□□ -0.89
LSM3YLR438C-A MRPL33P20084 86 aa9.49□□□□□ -0.89
LSM3YLR438C-A RPL16BP26785 198 aaKnown RBP9.49□□□□□ -0.89
LSM3YLR438C-A ARL3Q02804 198 aa9.49□□□□□ -0.89
LSM3YLR438C-A DXO1Q06349 442 aa9.49□□□□□ -0.89
LSM3YLR438C-A TY1A-HP0C2I4 478 aaKnown RBP9.48□□□□□ -0.89
LSM3YLR438C-A BRP1P53194 125 aa9.48□□□□□ -0.89
LSM3YLR438C-A TVP18Q04767 167 aa9.48□□□□□ -0.89
LSM3YLR438C-A VHS2P40463 436 aa9.47□□□□□ -0.89
LSM3YLR438C-A YCH1P42937 148 aa9.47□□□□□ -0.89
LSM3YLR438C-A CYT2Q00873 224 aa9.47□□□□□ -0.89
LSM3YLR438C-A AIM34Q03673 198 aa9.47□□□□□ -0.89
LSM3YLR438C-A FSF1Q12029 327 aaKnown RBP9.47□□□□□ -0.89
LSM3YLR438C-A YCR024C-BQ3E7Z8 88 aa9.47□□□□□ -0.89
LSM3YLR438C-A YBR126W-AQ8TGU7 68 aa9.47□□□□□ -0.89
LSM3YLR438C-A YCR001WP25347 104 aa9.46□□□□□ -0.9
LSM3YLR438C-A YGR149WP48236 432 aa9.46□□□□□ -0.9
LSM3YLR438C-A SEC4P07560 215 aaKnown RBP9.45□□□□□ -0.9
LSM3YLR438C-A RRT13P40042 185 aa9.45□□□□□ -0.9
LSM3YLR438C-A SGF11Q03067 99 aa9.44□□□□□ -0.9
LSM3YLR438C-A RPS8AP0CX39 200 aaKnown RBP9.43□□□□□ -0.9
LSM3YLR438C-A RPS8BP0CX40 200 aaKnown RBP9.43□□□□□ -0.9
LSM3YLR438C-A YRA2P36036 203 aaKnown RBP RIP-Chip data9.43□□□□□ -0.9not detected
LSM3YLR438C-A SEC72P39742 193 aaKnown RBP9.43□□□□□ -0.9
LSM3YLR438C-A SCW10Q04951 389 aa9.43□□□□□ -0.9
LSM3YLR438C-A VAM10Q08474 114 aa9.43□□□□□ -0.9
LSM3YLR438C-A MRPL28P36527 147 aa9.42□□□□□ -0.9
LSM3YLR438C-A SDH8P38345 138 aa9.42□□□□□ -0.9
LSM3YLR438C-A AUA1P32450 94 aa9.41□□□□□ -0.9
LSM3YLR438C-A YPS5P53057 165 aa9.41□□□□□ -0.9
LSM3YLR438C-A RDS3Q06835 107 aaPredicted RBP9.41□□□□□ -0.9
LSM3YLR438C-A YLR042CQ07990 161 aa9.41□□□□□ -0.9
LSM3YLR438C-A RPL42AP0CX27 106 aaKnown RBP9.4□□□□□ -0.9
LSM3YLR438C-A RPL42BP0CX28 106 aaKnown RBP9.4□□□□□ -0.9
LSM3YLR438C-A KTI12P34253 313 aaKnown RBP9.4□□□□□ -0.9
LSM3YLR438C-A TEM1P38987 245 aa9.39□□□□□ -0.91
LSM3YLR438C-A YGL118CP53132 145 aa9.39□□□□□ -0.91
LSM3YLR438C-A YKR032WP36127 104 aa9.38□□□□□ -0.91
LSM3YLR438C-A HAL1Q01766 294 aa9.38□□□□□ -0.91
LSM3YLR438C-A CMC2Q3E7A4 109 aa9.38□□□□□ -0.91
LSM3YLR438C-A SSS1P35179 80 aa9.37□□□□□ -0.91
LSM3YLR438C-A YNL217WP40152 326 aa9.37□□□□□ -0.91
LSM3YLR438C-A ATP23P53722 227 aa9.36□□□□□ -0.91
LSM3YLR438C-A MED7Q08278 222 aa9.36□□□□□ -0.91
LSM3YLR438C-A YGR240C-AQ3E786 66 aa9.36□□□□□ -0.91
LSM3YLR438C-A SAL1D6W196 494 aa9.35□□□□□ -0.91
LSM3YLR438C-A DGA1Q08650 418 aa9.35□□□□□ -0.91
LSM3YLR438C-A YPR014CQ6B0W2 109 aa9.35□□□□□ -0.91
LSM3YLR438C-A YCR023CP25351 611 aa9.33□□□□□ -0.92
LSM3YLR438C-A PET8P38921 284 aa9.33□□□□□ -0.92
LSM3YLR438C-A DCV1P43595 202 aa9.33□□□□□ -0.92
LSM3YLR438C-A CUE4Q04201 117 aaPredicted RBP9.33□□□□□ -0.92
LSM3YLR438C-A YNL200CP40165 246 aaKnown RBP9.32□□□□□ -0.92
LSM3YLR438C-A PMP3P87284 55 aa9.32□□□□□ -0.92
LSM3YLR438C-A HTL1Q9URQ5 78 aa9.32□□□□□ -0.92
LSM3YLR438C-A KRE9P39005 276 aa9.31□□□□□ -0.92
LSM3YLR438C-A YER076CP40049 302 aa9.31□□□□□ -0.92
LSM3YLR438C-A YER134CP40081 178 aa9.31□□□□□ -0.92
LSM3YLR438C-A PFY1P07274 126 aa9.3□□□□□ -0.92
LSM3YLR438C-A GSP1P32835 219 aaKnown RBP9.3□□□□□ -0.92
LSM3YLR438C-A GSP2P32836 220 aaKnown RBP9.3□□□□□ -0.92
LSM3YLR438C-A YPT53P36019 220 aa9.3□□□□□ -0.92
LSM3YLR438C-A YKR070WP36151 352 aaKnown RBP9.3□□□□□ -0.92
LSM3YLR438C-A GLO1P50107 326 aa9.3□□□□□ -0.92
LSM3YLR438C-A YIL014C-AQ02598 104 aa9.3□□□□□ -0.92
LSM3YLR438C-A CRC1Q12289 327 aa9.29□□□□□ -0.92
LSM3YLR438C-A CDC40P40968 455 aaPredicted RBP9.28□□□□□ -0.92
LSM3YLR438C-A ERV14P53173 138 aa9.28□□□□□ -0.92
LSM3YLR438C-A MRPL11P36521 249 aaPredicted RBP9.27□□□□□ -0.93
LSM3YLR438C-A OST3P48439 350 aa9.27□□□□□ -0.93
LSM3YLR438C-A MGR2Q02889 113 aa9.27□□□□□ -0.93
LSM3YLR438C-A COA6Q3E846 104 aa9.25□□□□□ -0.93
LSM3YLR438C-A AQY1P0CD91 305 aa9.24□□□□□ -0.93
LSM3YLR438C-A PRE1P22141 198 aaKnown RBP9.24□□□□□ -0.93
LSM3YLR438C-A PCL2P25693 308 aa9.24□□□□□ -0.93
LSM3YLR438C-A SEN15Q04675 128 aa9.24□□□□□ -0.93
LSM3YLR438C-A YOR008C-AQ3E7B9 74 aa9.24□□□□□ -0.93
LSM3YLR438C-A UBC5P15732 148 aa9.23□□□□□ -0.93
LSM3YLR438C-A TOS6P48560 102 aa9.23□□□□□ -0.93
LSM3YLR438C-A FCF1Q05498 189 aaPredicted RBP9.23□□□□□ -0.93
LSM3YLR438C-A YIL134C-AQ45U18 67 aa9.23□□□□□ -0.93
LSM3YLR438C-A POP3P53833 195 aaPredicted RBP9.22□□□□□ -0.93
LSM3YLR438C-A ERG27Q12452 347 aaKnown RBP9.22□□□□□ -0.93
LSM3YLR438C-A YBR209WP38311 105 aa9.21□□□□□ -0.94
LSM3YLR438C-A SPC1P46965 94 aa9.21□□□□□ -0.94
LSM3YLR438C-A ERI1P62651 68 aaKnown RBP9.21□□□□□ -0.94
LSM3YLR438C-A PKR1Q03880 122 aaKnown RBP9.21□□□□□ -0.94
LSM3YLR438C-A YIL059CP40520 121 aa9.2□□□□□ -0.94
LSM3YLR438C-A DPP1Q05521 289 aa9.2□□□□□ -0.94
LSM3YLR438C-A ADH2P00331 348 aaKnown RBP9.19□□□□□ -0.94
LSM3YLR438C-A YGL015CP33199 130 aa9.19□□□□□ -0.94
LSM3YLR438C-A URM1P40554 99 aaPredicted RBP9.19□□□□□ -0.94
LSM3YLR438C-A YJL028WP47062 111 aa9.19□□□□□ -0.94
LSM3YLR438C-A YDR042CQ03205 200 aa9.19□□□□□ -0.94
LSM3YLR438C-A RPL27BP0C2H7 136 aaKnown RBP9.18□□□□□ -0.94
LSM3YLR438C-A HMRA2P0CY13 119 aa9.18□□□□□ -0.94
LSM3YLR438C-A ARC15P40518 154 aaRIP-Chip data9.18□□□□□ -0.94not detected
LSM3YLR438C-A RPR2P40571 144 aa9.18□□□□□ -0.94
LSM3YLR438C-A CNL1Q06333 122 aa9.18□□□□□ -0.94
LSM3YLR438C-A RPL16AP26784 199 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 69.7 ms