RNA–Protein interactions for RNA: YLR007W

NSE1, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene NSE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSE1YLR007W YJL197C-AP0C5P0 93 aa2.84□□□□□ -1.95
NSE1YLR007W YFL051CP43552 160 aa2.84□□□□□ -1.95
NSE1YLR007W YMR082CQ04276 118 aa2.84□□□□□ -1.95
NSE1YLR007W YSP2Q06681 1438 aa2.84□□□□□ -1.96
NSE1YLR007W UTR5P32630 166 aa2.83□□□□□ -1.96
NSE1YLR007W DSE2P38844 325 aa2.83□□□□□ -1.96
NSE1YLR007W MSL1P40567 111 aaPredicted RBP2.83□□□□□ -1.96
NSE1YLR007W RSM19P53733 91 aaPredicted RBP2.83□□□□□ -1.96
NSE1YLR007W CMC4Q3E7A9 73 aa2.83□□□□□ -1.96
NSE1YLR007W ECM12O13529 151 aa2.82□□□□□ -1.96
NSE1YLR007W RPL36BO14455 100 aaKnown RBP2.82□□□□□ -1.96
NSE1YLR007W RPL36AP05745 100 aaPredicted RBP2.82□□□□□ -1.96
NSE1YLR007W RPL40AP0CH08 128 aaKnown RBP2.82□□□□□ -1.96
NSE1YLR007W RPL40BP0CH09 128 aaKnown RBP2.82□□□□□ -1.96
NSE1YLR007W EMC5P40540 141 aa2.82□□□□□ -1.96
NSE1YLR007W YLR296WQ05898 108 aa2.82□□□□□ -1.96
NSE1YLR007W CDC39P25655 2108 aaKnown RBP2.81□□□□□ -1.96
NSE1YLR007W YPR096CO13587 100 aa2.81□□□□□ -1.96
NSE1YLR007W HMRA1P0CY11 126 aa2.81□□□□□ -1.96
NSE1YLR007W RPB7P34087 171 aa2.81□□□□□ -1.96
NSE1YLR007W YKR045CP36138 183 aa2.81□□□□□ -1.96
NSE1YLR007W RPL22BP56628 122 aaKnown RBP2.81□□□□□ -1.96
NSE1YLR007W YIL014C-AQ02598 104 aa2.81□□□□□ -1.96
NSE1YLR007W AVO2Q04749 426 aa2.81□□□□□ -1.96
NSE1YLR007W RPA190P10964 1664 aaKnown RBP2.81□□□□□ -1.96
NSE1YLR007W SRB6P32570 121 aa2.8□□□□□ -1.96
NSE1YLR007W PAU12P53343 120 aa2.8□□□□□ -1.96
NSE1YLR007W SNN1P48232 102 aa2.79□□□□□ -1.96
NSE1YLR007W MYO1P08964 1928 aa2.79□□□□□ -1.96
NSE1YLR007W GSC2P40989 1895 aa2.79□□□□□ -1.96
NSE1YLR007W FLO9P39712 1322 aa2.78□□□□□ -1.96
NSE1YLR007W YHR138CP38841 114 aaPredicted RBP2.78□□□□□ -1.96
NSE1YLR007W YIR020CP40575 100 aa2.78□□□□□ -1.96
NSE1YLR007W PCC1Q3E833 88 aa2.78□□□□□ -1.96
NSE1YLR007W TY1B-BRQ12193 1756 aa2.77□□□□□ -1.97
NSE1YLR007W PAU2P32612 120 aa2.77□□□□□ -1.97
NSE1YLR007W NRG2P38082 220 aa2.77□□□□□ -1.97
NSE1YLR007W YHL005CP38752 130 aa2.77□□□□□ -1.97
NSE1YLR007W MHF1Q3E835 90 aa2.77□□□□□ -1.97
NSE1YLR007W YLR419WQ06698 1435 aaKnown RBP2.76□□□□□ -1.97
NSE1YLR007W QCR8P08525 94 aa2.76□□□□□ -1.97
NSE1YLR007W YHR213WP0CI67 198 aa2.76□□□□□ -1.97
NSE1YLR007W ATG8P38182 117 aaRIP-Chip data2.76□□□□□ -1.97not detected
NSE1YLR007W HPA2Q06592 156 aa2.76□□□□□ -1.97
NSE1YLR007W SUS1Q6WNK7 96 aa2.76□□□□□ -1.97
NSE1YLR007W ESP1Q03018 1630 aa2.75□□□□□ -1.97
NSE1YLR007W SWR1Q05471 1514 aa2.75□□□□□ -1.97
NSE1YLR007W PFY1P07274 126 aa2.75□□□□□ -1.97
NSE1YLR007W PAU19P0CE85 124 aa2.75□□□□□ -1.97
NSE1YLR007W FPR1P20081 114 aaKnown RBP2.75□□□□□ -1.97
NSE1YLR007W PAU3P25610 124 aa2.75□□□□□ -1.97
NSE1YLR007W SRX1P36077 127 aa2.75□□□□□ -1.97
NSE1YLR007W YBR027CP38220 110 aa2.75□□□□□ -1.97
NSE1YLR007W RGM1Q00453 211 aa2.75□□□□□ -1.97
NSE1YLR007W MIX17Q03667 156 aa2.75□□□□□ -1.97
NSE1YLR007W YLR194CQ05777 254 aa2.75□□□□□ -1.97
NSE1YLR007W PAU24P38155 120 aa2.74□□□□□ -1.97
NSE1YLR007W CYB5P40312 120 aa2.74□□□□□ -1.97
NSE1YLR007W YDR042CQ03205 200 aa2.74□□□□□ -1.97
NSE1YLR007W VAM10Q08474 114 aa2.74□□□□□ -1.97
NSE1YLR007W YLR363W-AQ3E747 85 aa2.74□□□□□ -1.97
NSE1YLR007W LAA1P39526 2014 aa2.73□□□□□ -1.97
NSE1YLR007W YPK9Q12697 1472 aa2.73□□□□□ -1.97
NSE1YLR007W POR2P40478 281 aa2.73□□□□□ -1.97
NSE1YLR007W SED1Q01589 338 aa2.73□□□□□ -1.97
NSE1YLR007W SEN15Q04675 128 aa2.73□□□□□ -1.97
NSE1YLR007W HRT1Q08273 121 aa2.73□□□□□ -1.97
NSE1YLR007W BPT1P14772 1559 aa2.73□□□□□ -1.97
NSE1YLR007W SEC7P11075 2009 aaKnown RBP2.73□□□□□ -1.97
NSE1YLR007W PAU16P35994 123 aa2.72□□□□□ -1.97
NSE1YLR007W COX23P38824 151 aa2.72□□□□□ -1.97
NSE1YLR007W PAU15P40585 124 aa2.72□□□□□ -1.97
NSE1YLR007W RRT15Q3E811 62 aa2.72□□□□□ -1.97
NSE1YLR007W TY1B-NL2Q99337 1749 aaKnown RBP2.71□□□□□ -1.98
NSE1YLR007W LST8P41318 303 aa2.71□□□□□ -1.98
NSE1YLR007W DAN1P47178 298 aa2.71□□□□□ -1.98
NSE1YLR007W YRF1-2P40105 1681 aa2.71□□□□□ -1.98
NSE1YLR007W YGL014C-AP0C5N1 53 aa2.7□□□□□ -1.98
NSE1YLR007W TAR1Q8TGM6 124 aa2.7□□□□□ -1.98
NSE1YLR007W RSM18P40033 138 aa2.69□□□□□ -1.98
NSE1YLR007W GDB1Q06625 1536 aa2.68□□□□□ -1.98
NSE1YLR007W RPL33AP05744 107 aaKnown RBP2.68□□□□□ -1.98
NSE1YLR007W YCR085WP25650 117 aa2.68□□□□□ -1.98
NSE1YLR007W RPA12P32529 125 aaKnown RBP2.68□□□□□ -1.98
NSE1YLR007W YMR122CQ03879 124 aa2.68□□□□□ -1.98
NSE1YLR007W YMR321CQ04898 105 aa2.68□□□□□ -1.98
NSE1YLR007W YCL048W-AQ2V2Q2 79 aa2.68□□□□□ -1.98
NSE1YLR007W YMR175W-AQ3E766 64 aa2.68□□□□□ -1.98
NSE1YLR007W ENV10Q99382 181 aa2.68□□□□□ -1.98
NSE1YLR007W GCV3P39726 170 aaPredicted RBP2.67□□□□□ -1.98
NSE1YLR007W DNA2P38859 1522 aa2.67□□□□□ -1.98
NSE1YLR007W TY1B-DR1Q03855 1755 aa2.66□□□□□ -1.98
NSE1YLR007W TY1B-DR3Q99231 1755 aa2.66□□□□□ -1.98
NSE1YLR007W YBR219CP38317 127 aa2.66□□□□□ -1.98
NSE1YLR007W CWP2P43497 92 aa2.66□□□□□ -1.98
NSE1YLR007W RPL22AP05749 121 aaKnown RBP2.65□□□□□ -1.99
NSE1YLR007W ROX3P25046 220 aa2.65□□□□□ -1.99
NSE1YLR007W YHL037CP38733 133 aa2.65□□□□□ -1.99
NSE1YLR007W YEL008WP40001 126 aa2.65□□□□□ -1.99
NSE1YLR007W ICY1Q04329 127 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms