RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	CMC4	Q3E7A9	73 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	RPB3	P16370	318 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	ADE1	P27616	306 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	YBR027C	P38220	110 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	GOS1	P38736	223 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	PEP8	P40335	379 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	YJL218W	P40892	196 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	DAN1	P47178	298 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	MGA1	P53050	456 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	SMD2	Q06217	110 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	RFU1	Q08003	200 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	YOR186W	Q08560	144 aa		0.45	□□□□□ -2.34
PRP16	YKR086W	PST2	Q12335	198 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	CYR1	P08678	2026 aa	Known RBP	0.45	□□□□□ -2.34
PRP16	YKR086W	FMP49	A0A023PZB3	126 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	AHC2	P25649	128 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	IRC18	P47056	224 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	YGR039W	P53225	103 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	YNR064C	P53750	290 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	UPS1	Q05776	175 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	ATP14	Q12349	124 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	YMR105W-A	Q8TGS8	64 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	RPL26A	P05743	127 aa	Known RBP	0.44	□□□□□ -2.34
PRP16	YKR086W	UBC8	P28263	218 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	IPT1	P38954	527 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	YEL014C	P39999	101 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	SPC25	P40014	221 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	HUA1	P40325	198 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	BRP1	P53194	125 aa		0.44	□□□□□ -2.34
PRP16	YKR086W	RPL26B	P53221	127 aa	Known RBP	0.44	□□□□□ -2.34
PRP16	YKR086W	Q0255	P03881	472 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	ATP5	P09457	212 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	ERD2	P18414	219 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	IRC22	P40006	225 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	GTT1	P40582	234 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	LDB18	Q07887	179 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	YNG1	Q08465	219 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	YMR030W-A	Q3E760	96 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	UTP11	P34247	250 aa	Predicted RBP	0.43	□□□□□ -2.34
PRP16	YKR086W	YFL051C	P43552	160 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	DIE2	P50076	525 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	YGL230C	P53074	147 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	FIT3	Q08907	204 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	YOR385W	Q08909	290 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	Q0017	Q9ZZX8	53 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	FAS1	P07149	2051 aa	Known RBP	0.43	□□□□□ -2.34
PRP16	YKR086W	RPA12	P32529	125 aa	Known RBP	0.43	□□□□□ -2.34
PRP16	YKR086W	BAT2	P47176	376 aa	Known RBP	0.43	□□□□□ -2.34
PRP16	YKR086W	RPL37B	P51402	88 aa	Known RBP	0.43	□□□□□ -2.34
PRP16	YKR086W	YNL184C	P53876	108 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	SML1	Q04964	104 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	YOS1	Q3E834	85 aa		0.43	□□□□□ -2.34
PRP16	YKR086W	YLR236C	A0A023PZG4	107 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	DSE2	P38844	325 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	HYR1	P40581	163 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	HUR1	P45820	110 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	FSF1	Q12029	327 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	USB1	Q12208	290 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	YNL146C-A	Q3E7Z1	64 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	BLM10	P43583	2143 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	DDI2	P0CH63	225 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	DDI3	P0CH64	225 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	HSP150	P32478	413 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	RPL14A	P36105	138 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	RPL14B	P38754	138 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	NVJ1	P38881	321 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	NSE4	P43124	402 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	SPC1	P46965	94 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	RCF2	P53721	224 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	TVP18	Q04767	167 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	YDR029W	Q12111	104 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	MPD1	Q12404	318 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	YHR214C-D	P0CX93	97 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	UBC5	P15732	148 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	NRG2	P38082	220 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	YPT31	P38555	223 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	TIR3	P40552	269 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	GLC8	P41818	229 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	PAM16	P42949	149 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	YJL027C	P47063	138 aa	Predicted RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	COF1	Q03048	143 aa	Known RBP	0.42	□□□□□ -2.34
PRP16	YKR086W	SYM1	Q06563	197 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	RTR2	Q12378	196 aa		0.42	□□□□□ -2.34
PRP16	YKR086W	TRA1	P38811	3744 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	QCR6	P00127	147 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	COX8	P04039	78 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	ACP1	P32463	125 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	RPF1	P38805	295 aa	Known RBP	0.41	□□□□□ -2.34
PRP16	YKR086W	FLX1	P40464	311 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	TIM8	P57744	87 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	APS2	Q00381	147 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	YDC1	Q02896	317 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	YMR090W	Q04304	227 aa	Known RBP	0.41	□□□□□ -2.34
PRP16	YKR086W	YLR296W	Q05898	108 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	POC4	Q12245	148 aa	Predicted RBP	0.41	□□□□□ -2.34
PRP16	YKR086W	YLR361C-A	Q3E795	98 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	SPT14	P32363	452 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.41	□□□□□ -2.34	not detected
PRP16	YKR086W	YGR269W	P40326	108 aa		0.41	□□□□□ -2.34
PRP16	YKR086W	NQM1	P53228	333 aa	Predicted RBP	0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms