RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C VMA10P48836 114 aaKnown RBP1.16□□□□□ -2.22
YPT52YKR014C GPI11Q06636 219 aa1.16□□□□□ -2.22
YPT52YKR014C RIB3Q99258 208 aa1.16□□□□□ -2.22
YPT52YKR014C HKR1P41809 1802 aa1.15□□□□□ -2.22
YPT52YKR014C RPS1BP23248 255 aaKnown RBP1.15□□□□□ -2.23
YPT52YKR014C FYV5P25585 152 aa1.15□□□□□ -2.23
YPT52YKR014C CYC2P38909 366 aa1.15□□□□□ -2.23
YPT52YKR014C YIL102CP40488 101 aa1.15□□□□□ -2.23
YPT52YKR014C PHB1P40961 287 aa1.15□□□□□ -2.23
YPT52YKR014C RPL37AP49166 88 aaKnown RBP1.15□□□□□ -2.23
YPT52YKR014C SPG1P50088 95 aa1.15□□□□□ -2.23
YPT52YKR014C CSN9Q03981 162 aa1.15□□□□□ -2.23
YPT52YKR014C HUT1Q12520 339 aa1.15□□□□□ -2.23
YPT52YKR014C PMD1P32634 1753 aa1.14□□□□□ -2.23
YPT52YKR014C CDC39P25655 2108 aaKnown RBP1.14□□□□□ -2.23
YPT52YKR014C YHR140WP38842 239 aa1.14□□□□□ -2.23
YPT52YKR014C LSM8P47093 109 aaKnown RBP1.14□□□□□ -2.23
YPT52YKR014C DIE2P50076 525 aa1.14□□□□□ -2.23
YPT52YKR014C EMC4P53073 190 aa1.14□□□□□ -2.23
YPT52YKR014C SOM1Q05676 74 aa1.14□□□□□ -2.23
YPT52YKR014C RAF1Q06891 181 aa1.14□□□□□ -2.23
YPT52YKR014C CCW12Q12127 133 aa1.14□□□□□ -2.23
YPT52YKR014C DDP1Q99321 188 aaKnown RBP1.14□□□□□ -2.23
YPT52YKR014C YGL204CP53089 101 aa1.13□□□□□ -2.23
YPT52YKR014C YCL001W-AP87012 153 aa1.13□□□□□ -2.23
YPT52YKR014C SED1Q01589 338 aa1.13□□□□□ -2.23
YPT52YKR014C FAS2P19097 1887 aaKnown RBP1.12□□□□□ -2.23
YPT52YKR014C FLO1P32768 1537 aa1.12□□□□□ -2.23
YPT52YKR014C ATG8P38182 117 aaRIP-Chip data1.12□□□□□ -2.23not detected
YPT52YKR014C GIM4P40005 111 aaKnown RBP1.12□□□□□ -2.23
YPT52YKR014C YGR042WP53227 271 aa1.12□□□□□ -2.23
YPT52YKR014C YNL019CP53975 284 aa1.12□□□□□ -2.23
YPT52YKR014C LCL2Q08045 131 aa1.12□□□□□ -2.23
YPT52YKR014C RPL33AP05744 107 aaKnown RBP1.11□□□□□ -2.23
YPT52YKR014C RPL14AP36105 138 aaKnown RBP1.11□□□□□ -2.23
YPT52YKR014C RPL14BP38754 138 aaKnown RBP1.11□□□□□ -2.23
YPT52YKR014C TMA23Q03525 211 aa1.11□□□□□ -2.23
YPT52YKR014C YOR385WQ08909 290 aa1.11□□□□□ -2.23
YPT52YKR014C MHF1Q3E835 90 aa1.11□□□□□ -2.23
YPT52YKR014C VPS13Q07878 3144 aa1.1□□□□□ -2.23
YPT52YKR014C SUA7P29055 345 aaPredicted RBP1.1□□□□□ -2.23
YPT52YKR014C HPM1P40481 377 aa1.1□□□□□ -2.23
YPT52YKR014C SEN15Q04675 128 aa1.1□□□□□ -2.23
YPT52YKR014C SPC2Q04969 178 aa1.1□□□□□ -2.23
YPT52YKR014C NAT5Q08689 176 aa1.1□□□□□ -2.23
YPT52YKR014C HFA1P32874 2273 aa1.1□□□□□ -2.23
YPT52YKR014C FMP49A0A023PZB3 126 aa1.09□□□□□ -2.23
YPT52YKR014C MRPL44P19956 98 aa1.09□□□□□ -2.23
YPT52YKR014C YCR001WP25347 104 aa1.09□□□□□ -2.23
YPT52YKR014C ACP1P32463 125 aa1.09□□□□□ -2.23
YPT52YKR014C RPS1AP33442 255 aaKnown RBP1.09□□□□□ -2.23
YPT52YKR014C SRL3P36167 246 aa1.09□□□□□ -2.23
YPT52YKR014C POP7P38291 140 aa1.09□□□□□ -2.23
YPT52YKR014C YNL122CP53921 115 aaPredicted RBP1.09□□□□□ -2.23
YPT52YKR014C ELC1Q03071 99 aa1.09□□□□□ -2.23
YPT52YKR014C YLR361C-AQ3E795 98 aa1.09□□□□□ -2.23
YPT52YKR014C GSC2P40989 1895 aa1.09□□□□□ -2.24
YPT52YKR014C RAD50P12753 1312 aa1.09□□□□□ -2.24
YPT52YKR014C HAP2P06774 265 aa1.08□□□□□ -2.24
YPT52YKR014C YOL013W-AP0C272 63 aaPredicted RBP1.08□□□□□ -2.24
YPT52YKR014C YGL014C-AP0C5N1 53 aa1.08□□□□□ -2.24
YPT52YKR014C YCR050CP25630 102 aa1.08□□□□□ -2.24
YPT52YKR014C UGX2P32772 223 aa1.08□□□□□ -2.24
YPT52YKR014C SFT2P38166 215 aa1.08□□□□□ -2.24
YPT52YKR014C YGR017WP53210 297 aa1.08□□□□□ -2.24
YPT52YKR014C YDR278CQ05612 105 aa1.08□□□□□ -2.24
YPT52YKR014C YOR072WQ08486 104 aa1.08□□□□□ -2.24
YPT52YKR014C ATP14Q12349 124 aa1.08□□□□□ -2.24
YPT52YKR014C YNL277W-AQ3E7Z0 62 aa1.08□□□□□ -2.24
YPT52YKR014C FUN14P18411 198 aa1.07□□□□□ -2.24
YPT52YKR014C ANB1P19211 157 aa1.07□□□□□ -2.24
YPT52YKR014C QCR10P37299 77 aa1.07□□□□□ -2.24
YPT52YKR014C TRS20P38334 175 aa1.07□□□□□ -2.24
YPT52YKR014C PRS3P38689 320 aaKnown RBP1.07□□□□□ -2.24
YPT52YKR014C RPS20P38701 121 aaKnown RBP1.07□□□□□ -2.24
YPT52YKR014C RPL37BP51402 88 aaKnown RBP1.07□□□□□ -2.24
YPT52YKR014C BRP1P53194 125 aa1.07□□□□□ -2.24
YPT52YKR014C YPL067CQ02754 198 aa1.07□□□□□ -2.24
YPT52YKR014C YAL064WP39711 94 aa1.06□□□□□ -2.24
YPT52YKR014C YMR122CQ03879 124 aa1.06□□□□□ -2.24
YPT52YKR014C SDH7Q04401 133 aa1.06□□□□□ -2.24
YPT52YKR014C IRC21Q04772 201 aa1.06□□□□□ -2.24
YPT52YKR014C CNL1Q06333 122 aa1.06□□□□□ -2.24
YPT52YKR014C YHR213WP0CI67 198 aa1.05□□□□□ -2.24
YPT52YKR014C NMT1P14743 455 aa1.05□□□□□ -2.24
YPT52YKR014C HYM1P32464 399 aa1.05□□□□□ -2.24
YPT52YKR014C PHS1P40857 217 aa1.05□□□□□ -2.24
YPT52YKR014C LST8P41318 303 aa1.05□□□□□ -2.24
YPT52YKR014C YJL009WP47078 108 aa1.05□□□□□ -2.24
YPT52YKR014C YGL149WP53116 101 aa1.05□□□□□ -2.24
YPT52YKR014C TIM8P57744 87 aa1.05□□□□□ -2.24
YPT52YKR014C TVP18Q04767 167 aa1.05□□□□□ -2.24
YPT52YKR014C NKP2Q06162 153 aa1.05□□□□□ -2.24
YPT52YKR014C KTI11Q3E840 82 aa1.05□□□□□ -2.24
YPT52YKR014C Q0144Q9ZZW2 109 aa1.05□□□□□ -2.24
YPT52YKR014C MYO1P08964 1928 aa1.05□□□□□ -2.24
YPT52YKR014C TRA1P38811 3744 aa1.04□□□□□ -2.24
YPT52YKR014C YER188C-AP0C0V2 99 aa1.04□□□□□ -2.24
YPT52YKR014C RPS22AP0C0W1 130 aaKnown RBP1.04□□□□□ -2.24
YPT52YKR014C RPL40AP0CH08 128 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms