RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	UBC4	P15731	148 aa		0.91	□□□□□ -2.26
APL1	YJR005W	DDR48	P18899	430 aa	Known RBP	0.91	□□□□□ -2.26
APL1	YJR005W	RPL16A	P26784	199 aa	Known RBP	0.91	□□□□□ -2.26
APL1	YJR005W	RPL16B	P26785	198 aa	Known RBP	0.91	□□□□□ -2.26
APL1	YJR005W	TOM6	P33448	61 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YKL097C	P34245	136 aa		0.91	□□□□□ -2.26
APL1	YJR005W	SNF11	P38956	169 aa		0.91	□□□□□ -2.26
APL1	YJR005W	GGC1	P38988	300 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YAL064W	P39711	94 aa		0.91	□□□□□ -2.26
APL1	YJR005W	RRT13	P40042	185 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YJL028W	P47062	111 aa		0.91	□□□□□ -2.26
APL1	YJR005W	MPC1	P53157	130 aa	Known RBP	0.91	□□□□□ -2.26
APL1	YJR005W	RSM19	P53733	91 aa	Predicted RBP	0.91	□□□□□ -2.26
APL1	YJR005W	RPL22B	P56628	122 aa	Known RBP	0.91	□□□□□ -2.26
APL1	YJR005W	YDR102C	Q03864	110 aa		0.91	□□□□□ -2.26
APL1	YJR005W	RIM9	Q04734	239 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YLR296W	Q05898	108 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YOR385W	Q08909	290 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YOR015W	Q12169	119 aa		0.91	□□□□□ -2.26
APL1	YJR005W	ATO3	Q12359	275 aa		0.91	□□□□□ -2.26
APL1	YJR005W	DFM1	Q12743	341 aa	Known RBP	0.91	□□□□□ -2.26
APL1	YJR005W	COX19	Q3E731	98 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YAL063C-A	Q3E791	96 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YCR024C-B	Q3E7Z8	88 aa		0.91	□□□□□ -2.26
APL1	YJR005W	YFL041W-A	Q3E817	63 aa		0.91	□□□□□ -2.26
APL1	YJR005W	NAG1	Q8TGN9	163 aa		0.91	□□□□□ -2.26
APL1	YJR005W	RIM15	P43565	1770 aa		0.91	□□□□□ -2.26
APL1	YJR005W	MSB2	P32334	1306 aa		0.9	□□□□□ -2.27
APL1	YJR005W	RPS19A	P07280	144 aa	Known RBP	0.9	□□□□□ -2.27
APL1	YJR005W	RPS19B	P07281	144 aa	Predicted RBP	0.9	□□□□□ -2.27
APL1	YJR005W	SEC11	P15367	167 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YKL044W	P36092	106 aa		0.9	□□□□□ -2.27
APL1	YJR005W	UMP1	P38293	148 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YHL042W	P38729	150 aa		0.9	□□□□□ -2.27
APL1	YJR005W	FYV4	P38783	130 aa	Predicted RBP	0.9	□□□□□ -2.27
APL1	YJR005W	HTD2	P38790	280 aa	Known RBP	0.9	□□□□□ -2.27
APL1	YJR005W	SVP26	P38869	228 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YFL019C	P43576	117 aa		0.9	□□□□□ -2.27
APL1	YJR005W	PIR5	P46999	287 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YGR018C	P53211	109 aa		0.9	□□□□□ -2.27
APL1	YJR005W	POP3	P53833	195 aa	Predicted RBP	0.9	□□□□□ -2.27
APL1	YJR005W	IGO1	P53897	168 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YMR295C	Q03559	197 aa		0.9	□□□□□ -2.27
APL1	YJR005W	ELP6	Q04868	273 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YOR292C	Q08743	309 aa		0.9	□□□□□ -2.27
APL1	YJR005W	NIP7	Q08962	181 aa	Known RBP	0.9	□□□□□ -2.27
APL1	YJR005W	YDL211C	Q12121	372 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YLR146W-A	Q2V2P1	62 aa		0.9	□□□□□ -2.27
APL1	YJR005W	YHR214C-E	Q8TGK0	99 aa		0.9	□□□□□ -2.27
APL1	YJR005W	DNF3	Q12674	1656 aa		0.9	□□□□□ -2.27
APL1	YJR005W	IML1	P47170	1584 aa		0.9	□□□□□ -2.27
APL1	YJR005W	FKS3	Q04952	1785 aa		0.9	□□□□□ -2.27
APL1	YJR005W	BUD3	P25558	1636 aa		0.89	□□□□□ -2.27
APL1	YJR005W	MDH2	P22133	377 aa		0.89	□□□□□ -2.27
APL1	YJR005W	RPB7	P34087	171 aa		0.89	□□□□□ -2.27
APL1	YJR005W	OM14	P38325	134 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YER135C	P40082	130 aa		0.89	□□□□□ -2.27
APL1	YJR005W	DFG10	P40526	253 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YFR035C	P43608	114 aa		0.89	□□□□□ -2.27
APL1	YJR005W	RPL21A	Q02753	160 aa	Known RBP	0.89	□□□□□ -2.27
APL1	YJR005W	MIM1	Q08176	113 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YOR105W	Q08504	108 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YPL247C	Q12523	523 aa		0.89	□□□□□ -2.27
APL1	YJR005W	RPL21B	Q12672	160 aa	Known RBP	0.89	□□□□□ -2.27
APL1	YJR005W	MHF2	Q3E829	80 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YLR365W	Q7LIF2	110 aa		0.89	□□□□□ -2.27
APL1	YJR005W	ODC2	Q99297	307 aa		0.89	□□□□□ -2.27
APL1	YJR005W	VMR1	P38735	1592 aa		0.89	□□□□□ -2.27
APL1	YJR005W	APC1	P53886	1748 aa		0.89	□□□□□ -2.27
APL1	YJR005W	IMP1	P28627	190 aa		0.89	□□□□□ -2.27
APL1	YJR005W	FZF1	P32805	299 aa		0.89	□□□□□ -2.27
APL1	YJR005W	TIM12	P32830	109 aa		0.89	□□□□□ -2.27
APL1	YJR005W	MRPL39	P36533	70 aa		0.89	□□□□□ -2.27
APL1	YJR005W	BOL2	P53082	120 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YGL193C	P53097	103 aa		0.89	□□□□□ -2.27
APL1	YJR005W	TPC1	P53257	314 aa		0.89	□□□□□ -2.27
APL1	YJR005W	LSM6	Q06406	86 aa	Known RBP	0.89	□□□□□ -2.27
APL1	YJR005W	SYM1	Q06563	197 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YOR268C	Q08734	132 aa		0.89	□□□□□ -2.27
APL1	YJR005W	SMT3	Q12306	101 aa	Known RBP	0.89	□□□□□ -2.27
APL1	YJR005W	PCL9	Q12477	304 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YDR381C-A	Q3E6R5	114 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YMR175W-A	Q3E766	64 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YPL038W-A	Q3E7B4	63 aa		0.89	□□□□□ -2.27
APL1	YJR005W	YML100W-A	Q8TGT0	57 aa		0.89	□□□□□ -2.27
APL1	YJR005W	CYR1	P08678	2026 aa	Known RBP	0.88	□□□□□ -2.27
APL1	YJR005W	MRPL31	P14063	131 aa	Predicted RBP	0.88	□□□□□ -2.27
APL1	YJR005W	FPR2	P32472	135 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU2	P32612	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	GPX1	P36014	167 aa		0.88	□□□□□ -2.27
APL1	YJR005W	DSE2	P38844	325 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PET8	P38921	284 aa		0.88	□□□□□ -2.27
APL1	YJR005W	TIM17	P39515	158 aa		0.88	□□□□□ -2.27
APL1	YJR005W	RSM18	P40033	138 aa		0.88	□□□□□ -2.27
APL1	YJR005W	YER187W	P40102	141 aa		0.88	□□□□□ -2.27
APL1	YJR005W	LST8	P41318	303 aa		0.88	□□□□□ -2.27
APL1	YJR005W	ICS3	P47034	131 aa		0.88	□□□□□ -2.27
APL1	YJR005W	VPS55	P47111	140 aa		0.88	□□□□□ -2.27
APL1	YJR005W	SPG1	P50088	95 aa		0.88	□□□□□ -2.27
APL1	YJR005W	MZM1	Q03429	123 aa	Predicted RBP	0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms