RNA–Protein interactions for RNA: YJL194W

CDC6, Transcript of Essential ATP-binding protein required for DNA replication, yeast

Gene CDC6, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC6	YJL194W	YCR050C	P25630	102 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	SWD3	P38123	315 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	RRT1	P38192	103 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	YEL073C	P39974	107 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	RIM9	Q04734	239 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	YMR252C	Q04814	134 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	NMA1	Q06178	401 aa	Known RBP	3.22	□□□□□ -1.89
CDC6	YJL194W	CSI2	Q08054	341 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	YIL134C-A	Q45U18	67 aa		3.22	□□□□□ -1.89
CDC6	YJL194W	LAA1	P39526	2014 aa		3.21	□□□□□ -1.9
CDC6	YJL194W	PAM17	P36147	197 aa		3.21	□□□□□ -1.9
CDC6	YJL194W	GCV3	P39726	170 aa	Predicted RBP	3.21	□□□□□ -1.9
CDC6	YJL194W	YMR103C	Q04436	120 aa		3.21	□□□□□ -1.9
CDC6	YJL194W	YKR032W	P36127	104 aa		3.2	□□□□□ -1.9
CDC6	YJL194W	PHO88	P38264	188 aa	Predicted RBP	3.2	□□□□□ -1.9
CDC6	YJL194W	TVP23	P38962	199 aa		3.2	□□□□□ -1.9
CDC6	YJL194W	FLX1	P40464	311 aa		3.2	□□□□□ -1.9
CDC6	YJL194W	YPL067C	Q02754	198 aa		3.2	□□□□□ -1.9
CDC6	YJL194W	MRP17	P28778	131 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	CLB6	P32943	380 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	MRPL27	P36526	146 aa	Predicted RBP	3.19	□□□□□ -1.9
CDC6	YJL194W	YNL217W	P40152	326 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	EMC5	P40540	141 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	MZM1	Q03429	123 aa	Predicted RBP	3.19	□□□□□ -1.9
CDC6	YJL194W	CUE4	Q04201	117 aa	Predicted RBP	3.19	□□□□□ -1.9
CDC6	YJL194W	FIT1	Q04433	528 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	FCF1	Q05498	189 aa	Predicted RBP	3.19	□□□□□ -1.9
CDC6	YJL194W	ATG10	Q07879	167 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	YNR034W-A	Q3E841	98 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	SWM2	P40342	146 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	THG1	P53215	237 aa	Known RBP	3.19	□□□□□ -1.9
CDC6	YJL194W	YHP1	Q04116	353 aa		3.19	□□□□□ -1.9
CDC6	YJL194W	YMR090W	Q04304	227 aa	Known RBP	3.19	□□□□□ -1.9
CDC6	YJL194W	STT4	P37297	1900 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	RPS25B	P0C0T4	108 aa	Known RBP	3.18	□□□□□ -1.9
CDC6	YJL194W	MIG1	P27705	504 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	FZF1	P32805	299 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	MRPL11	P36521	249 aa	Predicted RBP	3.18	□□□□□ -1.9
CDC6	YJL194W	SNU13	P39990	126 aa	Known RBP	3.18	□□□□□ -1.9
CDC6	YJL194W	MPC3	P53311	146 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	IGO1	P53897	168 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	CYT2	Q00873	224 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	RPL13A	Q12690	199 aa	Predicted RBP	3.18	□□□□□ -1.9
CDC6	YJL194W	RPS25A	Q3E792	108 aa	Predicted RBP	3.18	□□□□□ -1.9
CDC6	YJL194W	SCS22	Q6Q595	175 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	YOL085C	Q99345	113 aa		3.18	□□□□□ -1.9
CDC6	YJL194W	COX5B	P00425	151 aa		3.17	□□□□□ -1.9
CDC6	YJL194W	YFR045W	P43617	309 aa		3.17	□□□□□ -1.9
CDC6	YJL194W	PIR1	Q03178	341 aa		3.17	□□□□□ -1.9
CDC6	YJL194W	RAF1	Q06891	181 aa		3.17	□□□□□ -1.9
CDC6	YJL194W	IRC23	Q08416	157 aa		3.17	□□□□□ -1.9
CDC6	YJL194W	YAL064W	P39711	94 aa		3.16	□□□□□ -1.9
CDC6	YJL194W	CCS1	P40202	249 aa	Known RBP	3.16	□□□□□ -1.9
CDC6	YJL194W	UPS3	Q04006	179 aa		3.16	□□□□□ -1.9
CDC6	YJL194W	NAT5	Q08689	176 aa		3.16	□□□□□ -1.9
CDC6	YJL194W	YOL162W	P0CF19	215 aa		3.15	□□□□□ -1.9
CDC6	YJL194W	RPL40A	P0CH08	128 aa	Known RBP	3.15	□□□□□ -1.9
CDC6	YJL194W	RPL40B	P0CH09	128 aa	Known RBP	3.15	□□□□□ -1.9
CDC6	YJL194W	PAU24	P38155	120 aa		3.15	□□□□□ -1.9
CDC6	YJL194W	YHR130C	P38834	111 aa		3.15	□□□□□ -1.9
CDC6	YJL194W	YIL059C	P40520	121 aa		3.15	□□□□□ -1.9
CDC6	YJL194W	ELP6	Q04868	273 aa		3.15	□□□□□ -1.9
CDC6	YJL194W	MID2	P36027	376 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	YFR035C	P43608	114 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	YPR174C	Q06616	221 aa	Predicted RBP	3.14	□□□□□ -1.91
CDC6	YJL194W	YOR385W	Q08909	290 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	YOR381W-A	Q3E804	55 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	YOR376W-A	Q3E805	51 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	YHL042W	P38729	150 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	ERG25	P53045	309 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	PAU12	P53343	120 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	AVO2	Q04749	426 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	YOR015W	Q12169	119 aa		3.14	□□□□□ -1.91
CDC6	YJL194W	MRPS9	P38120	278 aa		3.13	□□□□□ -1.91
CDC6	YJL194W	PAU15	P40585	124 aa		3.13	□□□□□ -1.91
CDC6	YJL194W	KNH1	P50112	268 aa		3.13	□□□□□ -1.91
CDC6	YJL194W	YML079W	Q03629	201 aa		3.13	□□□□□ -1.91
CDC6	YJL194W	YLR146W-A	Q2V2P1	62 aa		3.13	□□□□□ -1.91
CDC6	YJL194W	PAU2	P32612	120 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	LSM2	P38203	95 aa	Known RBP	3.12	□□□□□ -1.91
CDC6	YJL194W	KRE9	P39005	276 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	RPL33B	P41056	107 aa	Known RBP	3.12	□□□□□ -1.91
CDC6	YJL194W	SMD3	P43321	101 aa	Known RBP	3.12	□□□□□ -1.91
CDC6	YJL194W	GPI19	Q04082	140 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	SOM1	Q05676	74 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	TMC1	Q08422	150 aa	Predicted RBP	3.12	□□□□□ -1.91
CDC6	YJL194W	YOR268C	Q08734	132 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	COX19	Q3E731	98 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	COA6	Q3E846	104 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	YLR365W	Q7LIF2	110 aa		3.12	□□□□□ -1.91
CDC6	YJL194W	UBC4	P15731	148 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	YKL044W	P36092	106 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	QCR10	P37299	77 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	YNR077C	P53758	84 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	PIN3	Q06449	215 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	YOS1	Q3E834	85 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	ATG40	Q99325	256 aa		3.11	□□□□□ -1.91
CDC6	YJL194W	YHR180W	P38868	163 aa		3.1	□□□□□ -1.91
CDC6	YJL194W	SNF11	P38956	169 aa		3.1	□□□□□ -1.91
CDC6	YJL194W	TDA2	P40045	126 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms