RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	LST8	P41318	303 aa		0.43	□□□□□ -2.34
URM1	YIL008W	SER2	P42941	309 aa		0.43	□□□□□ -2.34
URM1	YIL008W	YJR015W	P47090	510 aa		0.43	□□□□□ -2.34
URM1	YIL008W	CWC23	P52868	283 aa	Predicted RBP	0.43	□□□□□ -2.34
URM1	YIL008W	YGL204C	P53089	101 aa		0.43	□□□□□ -2.34
URM1	YIL008W	TOM7	P53507	60 aa		0.43	□□□□□ -2.34
URM1	YIL008W	YMR295C	Q03559	197 aa		0.43	□□□□□ -2.34
URM1	YIL008W	GRX3	Q03835	250 aa		0.43	□□□□□ -2.34
URM1	YIL008W	YCR075W-A	Q3E830	75 aa		0.43	□□□□□ -2.34
URM1	YIL008W	YAR023C	D6VPM8	179 aa		0.42	□□□□□ -2.34
URM1	YIL008W	COX9	P07255	59 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YDR034C-A	P0C289	58 aa		0.42	□□□□□ -2.34
URM1	YIL008W	RPS11A	P0CX47	156 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	RPS11B	P0CX48	156 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	PET54	P10834	293 aa		0.42	□□□□□ -2.34
URM1	YIL008W	DDR48	P18899	430 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	CNB1	P25296	175 aa		0.42	□□□□□ -2.34
URM1	YIL008W	RFA3	P26755	122 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	UBC8	P28263	218 aa		0.42	□□□□□ -2.34
URM1	YIL008W	SFK1	P35735	353 aa		0.42	□□□□□ -2.34
URM1	YIL008W	RRT1	P38192	103 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YHR138C	P38841	114 aa	Predicted RBP	0.42	□□□□□ -2.34
URM1	YIL008W	YER134C	P40081	178 aa		0.42	□□□□□ -2.34
URM1	YIL008W	PDS1	P40316	373 aa	Predicted RBP	0.42	□□□□□ -2.34
URM1	YIL008W	GPI2	P46961	280 aa		0.42	□□□□□ -2.34
URM1	YIL008W	SPC1	P46965	94 aa		0.42	□□□□□ -2.34
URM1	YIL008W	GPI14	P47088	403 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	YGR017W	P53210	297 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YIP3	P53633	176 aa		0.42	□□□□□ -2.34
URM1	YIL008W	LCL1	Q02786	101 aa		0.42	□□□□□ -2.34
URM1	YIL008W	SNO1	Q03144	224 aa		0.42	□□□□□ -2.34
URM1	YIL008W	TLG1	Q03322	224 aa		0.42	□□□□□ -2.34
URM1	YIL008W	SHH3	Q04487	196 aa		0.42	□□□□□ -2.34
URM1	YIL008W	SPC2	Q04969	178 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YMR226C	Q05016	267 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	COA4	Q05809	96 aa		0.42	□□□□□ -2.34
URM1	YIL008W	NMA1	Q06178	401 aa	Known RBP	0.42	□□□□□ -2.34
URM1	YIL008W	HRD1	Q08109	551 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YPR203W	Q08994	102 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YDR010C	Q12426	110 aa		0.42	□□□□□ -2.34
URM1	YIL008W	ADF1	Q2V2Q1	113 aa		0.42	□□□□□ -2.34
URM1	YIL008W	YLR365W	Q7LIF2	110 aa		0.42	□□□□□ -2.34
URM1	YIL008W	RTC6	O14464	93 aa		0.41	□□□□□ -2.34
URM1	YIL008W	SEN2	P16658	377 aa		0.41	□□□□□ -2.34
URM1	YIL008W	IDP1	P21954	428 aa	Known RBP	0.41	□□□□□ -2.34
URM1	YIL008W	HYP2	P23301	157 aa	Known RBP	0.41	□□□□□ -2.34
URM1	YIL008W	PAU24	P38155	120 aa		0.41	□□□□□ -2.34
URM1	YIL008W	NSA2	P40078	261 aa	Known RBP	0.41	□□□□□ -2.34
URM1	YIL008W	PAM16	P42949	149 aa		0.41	□□□□□ -2.34
URM1	YIL008W	SKI6	P46948	246 aa	Predicted RBP	0.41	□□□□□ -2.34
URM1	YIL008W	TMA22	P47089	198 aa	Predicted RBP	0.41	□□□□□ -2.34
URM1	YIL008W	ARP3	P47117	449 aa	Known RBP	0.41	□□□□□ -2.34
URM1	YIL008W	DIE2	P50076	525 aa		0.41	□□□□□ -2.34
URM1	YIL008W	MMS2	P53152	137 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YGR025W	P53216	100 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YGR042W	P53227	271 aa		0.41	□□□□□ -2.34
URM1	YIL008W	PAU12	P53343	120 aa		0.41	□□□□□ -2.34
URM1	YIL008W	EST3	Q03096	181 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YGL258W-A	Q3E740	77 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YGR240C-A	Q3E786	66 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YPR108W-A	Q3E7B3	70 aa		0.41	□□□□□ -2.34
URM1	YIL008W	RRT15	Q3E811	62 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YLR307C-A	Q3E825	87 aa		0.41	□□□□□ -2.34
URM1	YIL008W	HUG1	Q6Q5K6	68 aa		0.41	□□□□□ -2.34
URM1	YIL008W	YLL066W-B	Q8TGJ7	56 aa		0.41	□□□□□ -2.34
URM1	YIL008W	MBF1	O14467	151 aa	Known RBP	0.4	□□□□□ -2.35
URM1	YIL008W	YHR213W	P0CI67	198 aa		0.4	□□□□□ -2.35
URM1	YIL008W	AHC2	P25649	128 aa		0.4	□□□□□ -2.35
URM1	YIL008W	TRR1	P29509	319 aa	Known RBP	0.4	□□□□□ -2.35
URM1	YIL008W	PAU2	P32612	120 aa		0.4	□□□□□ -2.35
URM1	YIL008W	GSP2	P32836	220 aa	Known RBP	0.4	□□□□□ -2.35
URM1	YIL008W	YBL071C	P38185	102 aa		0.4	□□□□□ -2.35
URM1	YIL008W	YBR242W	P38331	238 aa		0.4	□□□□□ -2.35
URM1	YIL008W	EMC5	P40540	141 aa		0.4	□□□□□ -2.35
URM1	YIL008W	DYN2	Q02647	92 aa		0.4	□□□□□ -2.35
URM1	YIL008W	GRX5	Q02784	150 aa		0.4	□□□□□ -2.35
URM1	YIL008W	THI74	Q04083	370 aa		0.4	□□□□□ -2.35
URM1	YIL008W	SDH7	Q04401	133 aa		0.4	□□□□□ -2.35
URM1	YIL008W	YLR042C	Q07990	161 aa		0.4	□□□□□ -2.35
URM1	YIL008W	CCW12	Q12127	133 aa		0.4	□□□□□ -2.35
URM1	YIL008W	YLR099W-A	Q3E798	87 aa		0.4	□□□□□ -2.35
URM1	YIL008W	CMC4	Q3E7A9	73 aa		0.4	□□□□□ -2.35
URM1	YIL008W	YKL068W-A	Q3E826	78 aa		0.4	□□□□□ -2.35
URM1	YIL008W	FMP49	A0A023PZB3	126 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YPR010C-A	A5Z2X5	72 aa		0.39	□□□□□ -2.35
URM1	YIL008W	QCR7	P00128	127 aa		0.39	□□□□□ -2.35
URM1	YIL008W	RPL33A	P05744	107 aa	Known RBP	0.39	□□□□□ -2.35
URM1	YIL008W	TIR1	P10863	254 aa		0.39	□□□□□ -2.35
URM1	YIL008W	AHT1	P29589	182 aa		0.39	□□□□□ -2.35
URM1	YIL008W	FPR2	P32472	135 aa		0.39	□□□□□ -2.35
URM1	YIL008W	EMP24	P32803	203 aa	Known RBP	0.39	□□□□□ -2.35
URM1	YIL008W	PAM17	P36147	197 aa		0.39	□□□□□ -2.35
URM1	YIL008W	SFT2	P38166	215 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YBR013C	P38215	129 aa		0.39	□□□□□ -2.35
URM1	YIL008W	CSH1	P38287	376 aa		0.39	□□□□□ -2.35
URM1	YIL008W	NVJ1	P38881	321 aa		0.39	□□□□□ -2.35
URM1	YIL008W	AIM19	P40502	157 aa		0.39	□□□□□ -2.35
URM1	YIL008W	MSS2	P40990	351 aa		0.39	□□□□□ -2.35
URM1	YIL008W	IMP2	P46972	177 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YGL149W	P53116	101 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms