RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C SHU1P38751 150 aa2.33□□□□□ -2.04
PRP8YHR165C PIR3Q03180 325 aa2.32□□□□□ -2.04
PRP8YHR165C GAT3Q07928 141 aa2.32□□□□□ -2.04
PRP8YHR165C BNS1P50084 137 aa2.32□□□□□ -2.04
PRP8YHR165C MPC3P53311 146 aa2.32□□□□□ -2.04
PRP8YHR165C YMR254CQ04838 102 aa2.32□□□□□ -2.04
PRP8YHR165C SFT1P43682 97 aa2.32□□□□□ -2.04
PRP8YHR165C LPP1Q04396 274 aa2.32□□□□□ -2.04
PRP8YHR165C COX17Q12287 69 aa2.32□□□□□ -2.04
PRP8YHR165C ISF1P32488 338 aa2.32□□□□□ -2.04
PRP8YHR165C VTC1P40046 129 aaRIP-Chip data2.32□□□□□ -2.04not detected
PRP8YHR165C YJL118WP47022 219 aa2.32□□□□□ -2.04
PRP8YHR165C IMP1P28627 190 aa2.31□□□□□ -2.04
PRP8YHR165C YGR164WP53291 111 aa2.31□□□□□ -2.04
PRP8YHR165C PMD1P32634 1753 aa2.31□□□□□ -2.04
PRP8YHR165C YBR219CP38317 127 aa2.31□□□□□ -2.04
PRP8YHR165C NRM1P53718 249 aa2.31□□□□□ -2.04
PRP8YHR165C YPL014WQ02606 381 aa2.31□□□□□ -2.04
PRP8YHR165C UPS1Q05776 175 aa2.31□□□□□ -2.04
PRP8YHR165C YDL177CQ12257 170 aa2.31□□□□□ -2.04
PRP8YHR165C YIL054WP40524 105 aa2.31□□□□□ -2.04
PRP8YHR165C YCR041WP37265 110 aa2.31□□□□□ -2.04
PRP8YHR165C CUZ1P53899 274 aa2.31□□□□□ -2.04
PRP8YHR165C AIM34Q03673 198 aa2.31□□□□□ -2.04
PRP8YHR165C TIM18Q08749 192 aa2.31□□□□□ -2.04
PRP8YHR165C YOR034C-AQ3E735 80 aa2.31□□□□□ -2.04
PRP8YHR165C VMA9Q3E7B6 73 aa2.31□□□□□ -2.04
PRP8YHR165C ATS1P31386 333 aa2.3□□□□□ -2.04
PRP8YHR165C UTH1P36135 365 aa2.3□□□□□ -2.04
PRP8YHR165C YPI1P43587 155 aa2.3□□□□□ -2.04
PRP8YHR165C FCY1Q12178 158 aa2.3□□□□□ -2.04
PRP8YHR165C RPL36BO14455 100 aaKnown RBP2.3□□□□□ -2.04
PRP8YHR165C RPL36AP05745 100 aaPredicted RBP2.3□□□□□ -2.04
PRP8YHR165C YOR062CP36025 268 aa2.3□□□□□ -2.04
PRP8YHR165C HOT13P36078 116 aa2.3□□□□□ -2.04
PRP8YHR165C YLR194CQ05777 254 aa2.3□□□□□ -2.04
PRP8YHR165C YCR024C-BQ3E7Z8 88 aa2.3□□□□□ -2.04
PRP8YHR165C SEC11P15367 167 aa2.3□□□□□ -2.04
PRP8YHR165C PTH1P38876 190 aaKnown RBP2.3□□□□□ -2.04
PRP8YHR165C RRT13P40042 185 aa2.3□□□□□ -2.04
PRP8YHR165C YGL262WP53054 175 aa2.3□□□□□ -2.04
PRP8YHR165C MZM1Q03429 123 aaPredicted RBP2.3□□□□□ -2.04
PRP8YHR165C MRPS8Q03799 155 aa2.3□□□□□ -2.04
PRP8YHR165C LSM6Q06406 86 aaKnown RBP2.3□□□□□ -2.04
PRP8YHR165C YBL071CP38185 102 aa2.3□□□□□ -2.04
PRP8YHR165C YHR140WP38842 239 aa2.3□□□□□ -2.04
PRP8YHR165C POR1P04840 283 aaKnown RBP2.3□□□□□ -2.04
PRP8YHR165C SUT1P53032 299 aaKnown RBP2.3□□□□□ -2.04
PRP8YHR165C CUE4Q04201 117 aaPredicted RBP2.3□□□□□ -2.04
PRP8YHR165C SHH3Q04487 196 aa2.3□□□□□ -2.04
PRP8YHR165C MIC10Q96VH5 97 aa2.3□□□□□ -2.04
PRP8YHR165C YCR006CP25350 157 aa2.29□□□□□ -2.04
PRP8YHR165C EDC2P40023 145 aaPredicted RBP2.29□□□□□ -2.04
PRP8YHR165C MCH4Q08268 501 aa2.29□□□□□ -2.04
PRP8YHR165C RPL23AP0CX41 137 aaKnown RBP2.29□□□□□ -2.04
PRP8YHR165C RPL23BP0CX42 137 aaKnown RBP2.29□□□□□ -2.04
PRP8YHR165C SPG1P50088 95 aa2.29□□□□□ -2.04
PRP8YHR165C YDR010CQ12426 110 aa2.29□□□□□ -2.04
PRP8YHR165C YCL021W-AQ96VH3 125 aa2.29□□□□□ -2.04
PRP8YHR165C YGL118CP53132 145 aa2.29□□□□□ -2.04
PRP8YHR165C ECM19Q06011 112 aa2.29□□□□□ -2.04
PRP8YHR165C HUB1Q6Q546 73 aa2.29□□□□□ -2.04
PRP8YHR165C MRP10O75012 95 aa2.29□□□□□ -2.04
PRP8YHR165C SBH2P52871 88 aa2.29□□□□□ -2.04
PRP8YHR165C PCP1P53259 346 aa2.29□□□□□ -2.04
PRP8YHR165C ICY1Q04329 127 aa2.29□□□□□ -2.04
PRP8YHR165C YLR122CQ12312 125 aa2.29□□□□□ -2.04
PRP8YHR165C RPL33BP41056 107 aaKnown RBP2.29□□□□□ -2.04
PRP8YHR165C MIC27P50945 234 aa2.29□□□□□ -2.04
PRP8YHR165C ALG13P53178 202 aa2.29□□□□□ -2.04
PRP8YHR165C POC4Q12245 148 aaPredicted RBP2.29□□□□□ -2.04
PRP8YHR165C YGL235WP53071 178 aa2.28□□□□□ -2.04
PRP8YHR165C SMD1Q02260 146 aaPredicted RBP2.28□□□□□ -2.04
PRP8YHR165C YHR180WP38868 163 aa2.28□□□□□ -2.04
PRP8YHR165C FSH2Q05015 223 aa2.28□□□□□ -2.04
PRP8YHR165C RPL15AP05748 204 aaKnown RBP2.28□□□□□ -2.04
PRP8YHR165C YKL097CP34245 136 aa2.28□□□□□ -2.04
PRP8YHR165C UBC9P50623 157 aaPredicted RBP2.28□□□□□ -2.04
PRP8YHR165C BUD25P85052 153 aa2.28□□□□□ -2.04
PRP8YHR165C OST5Q92316 86 aa2.28□□□□□ -2.04
PRP8YHR165C RPL2AP0CX45 254 aaKnown RBP2.28□□□□□ -2.04
PRP8YHR165C RPL2BP0CX46 254 aaKnown RBP2.28□□□□□ -2.04
PRP8YHR165C YIL012WP40551 113 aa2.28□□□□□ -2.04
PRP8YHR165C YER175W-AQ8TGU4 54 aa2.28□□□□□ -2.04
PRP8YHR165C SPT4P32914 102 aaPredicted RBP2.28□□□□□ -2.05
PRP8YHR165C SPO24Q3E752 67 aa2.28□□□□□ -2.05
PRP8YHR165C Q0142Q9ZZW4 58 aa2.28□□□□□ -2.05
PRP8YHR165C SIP18P50263 79 aa2.27□□□□□ -2.05
PRP8YHR165C YOL159CQ08300 171 aa2.27□□□□□ -2.05
PRP8YHR165C MRPL27P36526 146 aaPredicted RBP2.27□□□□□ -2.05
PRP8YHR165C NCA3P46955 337 aa2.27□□□□□ -2.05
PRP8YHR165C YFL041W-AQ3E817 63 aa2.27□□□□□ -2.05
PRP8YHR165C YER039C-AP0CD97 72 aa2.27□□□□□ -2.05
PRP8YHR165C HUA1P40325 198 aa2.27□□□□□ -2.05
PRP8YHR165C LCL2Q08045 131 aa2.27□□□□□ -2.05
PRP8YHR165C YER078W-AQ3E7A2 54 aa2.27□□□□□ -2.05
PRP8YHR165C PET8P38921 284 aa2.27□□□□□ -2.05
PRP8YHR165C PAU7P39545 55 aa2.27□□□□□ -2.05
PRP8YHR165C YRA1Q12159 226 aaKnown RBP2.27□□□□□ -2.05
PRP8YHR165C YLL053CP0CD98 152 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 81.4 ms