RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W AYT1Q12226 474 aa2.73□□□□□ -1.97
BCD1YHR040W WIP1Q2V2P8 89 aa2.73□□□□□ -1.97
BCD1YHR040W YLR342W-AQ3E810 57 aa2.73□□□□□ -1.97
BCD1YHR040W MRPL31P14063 131 aaPredicted RBP2.72□□□□□ -1.97
BCD1YHR040W CPT1P17898 393 aa2.72□□□□□ -1.97
BCD1YHR040W SNF11P38956 169 aa2.72□□□□□ -1.97
BCD1YHR040W PRE5P40302 234 aaKnown RBP2.72□□□□□ -1.97
BCD1YHR040W YIR020CP40575 100 aa2.72□□□□□ -1.97
BCD1YHR040W NCA3P46955 337 aa2.72□□□□□ -1.97
BCD1YHR040W IMP2P46972 177 aa2.72□□□□□ -1.97
BCD1YHR040W SWT21P53873 357 aaPredicted RBP2.72□□□□□ -1.97
BCD1YHR040W YML079WQ03629 201 aa2.72□□□□□ -1.97
BCD1YHR040W DPP1Q05521 289 aa2.72□□□□□ -1.97
BCD1YHR040W CSI2Q08054 341 aa2.72□□□□□ -1.97
BCD1YHR040W ATO3Q12359 275 aa2.72□□□□□ -1.97
BCD1YHR040W TRA1P38811 3744 aa2.72□□□□□ -1.97
BCD1YHR040W RPL15AP05748 204 aaKnown RBP2.71□□□□□ -1.98
BCD1YHR040W YHR213WP0CI67 198 aa2.71□□□□□ -1.98
BCD1YHR040W HAP3P13434 144 aa2.71□□□□□ -1.98
BCD1YHR040W YCL042WP25572 119 aa2.71□□□□□ -1.98
BCD1YHR040W PAM17P36147 197 aa2.71□□□□□ -1.98
BCD1YHR040W LSM2P38203 95 aaKnown RBP2.71□□□□□ -1.98
BCD1YHR040W YER188WP40103 239 aa2.71□□□□□ -1.98
BCD1YHR040W RPR2P40571 144 aa2.71□□□□□ -1.98
BCD1YHR040W YPI1P43587 155 aa2.71□□□□□ -1.98
BCD1YHR040W YPS5P53057 165 aa2.71□□□□□ -1.98
BCD1YHR040W THG1P53215 237 aaKnown RBP2.71□□□□□ -1.98
BCD1YHR040W CAB4P53332 305 aa2.71□□□□□ -1.98
BCD1YHR040W TOM7P53507 60 aa2.71□□□□□ -1.98
BCD1YHR040W SEN15Q04675 128 aa2.71□□□□□ -1.98
BCD1YHR040W TRP1P00912 224 aa2.7□□□□□ -1.98
BCD1YHR040W RPL28P02406 149 aaKnown RBP2.7□□□□□ -1.98
BCD1YHR040W SEC4P07560 215 aaKnown RBP2.7□□□□□ -1.98
BCD1YHR040W CPR1P14832 162 aaKnown RBP2.7□□□□□ -1.98
BCD1YHR040W CDC39P25655 2108 aaKnown RBP2.7□□□□□ -1.98
BCD1YHR040W YKR045CP36138 183 aa2.7□□□□□ -1.98
BCD1YHR040W FYV4P38783 130 aaPredicted RBP2.7□□□□□ -1.98
BCD1YHR040W YHR140WP38842 239 aa2.7□□□□□ -1.98
BCD1YHR040W HAC1P41546 238 aa2.7□□□□□ -1.98
BCD1YHR040W SDS23P53172 527 aa2.7□□□□□ -1.98
BCD1YHR040W YGR219WP53307 113 aa2.7□□□□□ -1.98
BCD1YHR040W GPI19Q04082 140 aa2.7□□□□□ -1.98
BCD1YHR040W ARC18Q05933 178 aaKnown RBP2.7□□□□□ -1.98
BCD1YHR040W PAU23Q07987 124 aa2.7□□□□□ -1.98
BCD1YHR040W FSF1Q12029 327 aaKnown RBP2.7□□□□□ -1.98
BCD1YHR040W PAU17Q12370 124 aa2.7□□□□□ -1.98
BCD1YHR040W GSP1P32835 219 aaKnown RBP2.69□□□□□ -1.98
BCD1YHR040W GSP2P32836 220 aaKnown RBP2.69□□□□□ -1.98
BCD1YHR040W PET8P38921 284 aa2.69□□□□□ -1.98
BCD1YHR040W PEX22P39718 180 aa2.69□□□□□ -1.98
BCD1YHR040W YER134CP40081 178 aa2.69□□□□□ -1.98
BCD1YHR040W YFR057WP43625 151 aa2.69□□□□□ -1.98
BCD1YHR040W YJL027CP47063 138 aaPredicted RBP2.69□□□□□ -1.98
BCD1YHR040W GRH1Q04410 372 aaKnown RBP2.69□□□□□ -1.98
BCD1YHR040W TVP18Q04767 167 aa2.69□□□□□ -1.98
BCD1YHR040W TIM22Q12328 207 aa2.69□□□□□ -1.98
BCD1YHR040W FZF1P32805 299 aa2.68□□□□□ -1.98
BCD1YHR040W VMA11P32842 164 aa2.68□□□□□ -1.98
BCD1YHR040W APS1P35181 156 aa2.68□□□□□ -1.98
BCD1YHR040W YKL044WP36092 106 aa2.68□□□□□ -1.98
BCD1YHR040W YIL012WP40551 113 aa2.68□□□□□ -1.98
BCD1YHR040W MSL1P40567 111 aaPredicted RBP2.68□□□□□ -1.98
BCD1YHR040W YFL067WP43537 175 aa2.68□□□□□ -1.98
BCD1YHR040W YIP3P53633 176 aa2.68□□□□□ -1.98
BCD1YHR040W SPG4Q04438 115 aa2.68□□□□□ -1.98
BCD1YHR040W ATG39Q06159 398 aa2.68□□□□□ -1.98
BCD1YHR040W TMC1Q08422 150 aaPredicted RBP2.68□□□□□ -1.98
BCD1YHR040W NAT5Q08689 176 aa2.68□□□□□ -1.98
BCD1YHR040W PRM3Q08931 133 aa2.68□□□□□ -1.98
BCD1YHR040W FCY1Q12178 158 aa2.68□□□□□ -1.98
BCD1YHR040W HHF1P02309 103 aaKnown RBP2.67□□□□□ -1.98
BCD1YHR040W YCR023CP25351 611 aa2.67□□□□□ -1.98
BCD1YHR040W MRP49P32388 137 aa2.67□□□□□ -1.98
BCD1YHR040W YBR090CP38253 122 aa2.67□□□□□ -1.98
BCD1YHR040W MRPL49P40858 161 aaPredicted RBP2.67□□□□□ -1.98
BCD1YHR040W VPS55P47111 140 aa2.67□□□□□ -1.98
BCD1YHR040W YJR085CP47131 105 aaKnown RBP2.67□□□□□ -1.98
BCD1YHR040W YGL230CP53074 147 aa2.67□□□□□ -1.98
BCD1YHR040W ALG13P53178 202 aa2.67□□□□□ -1.98
BCD1YHR040W BRP1P53194 125 aa2.67□□□□□ -1.98
BCD1YHR040W POP3P53833 195 aaPredicted RBP2.67□□□□□ -1.98
BCD1YHR040W YMR317WQ04893 1140 aa2.67□□□□□ -1.98
BCD1YHR040W HOR7Q05827 59 aa2.67□□□□□ -1.98
BCD1YHR040W SRL1Q08673 210 aa2.67□□□□□ -1.98
BCD1YHR040W YDL157CQ12082 118 aa2.67□□□□□ -1.98
BCD1YHR040W PFY1P07274 126 aa2.66□□□□□ -1.98
BCD1YHR040W UTR5P32630 166 aa2.66□□□□□ -1.98
BCD1YHR040W YMR141CP40211 102 aa2.66□□□□□ -1.98
BCD1YHR040W TOS6P48560 102 aa2.66□□□□□ -1.98
BCD1YHR040W TOS8P53147 276 aa2.66□□□□□ -1.98
BCD1YHR040W YDR366CP87287 132 aa2.66□□□□□ -1.98
BCD1YHR040W MGR2Q02889 113 aa2.66□□□□□ -1.98
BCD1YHR040W YDR042CQ03205 200 aa2.66□□□□□ -1.98
BCD1YHR040W YOL160WQ08321 113 aa2.66□□□□□ -1.98
BCD1YHR040W CCW12Q12127 133 aa2.66□□□□□ -1.98
BCD1YHR040W YNL146C-AQ3E7Z1 64 aa2.66□□□□□ -1.98
BCD1YHR040W YPR014CQ6B0W2 109 aa2.66□□□□□ -1.98
BCD1YHR040W Q0297Q9ZZV8 51 aa2.66□□□□□ -1.98
BCD1YHR040W SEC11P15367 167 aa2.65□□□□□ -1.99
BCD1YHR040W ANB1P19211 157 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms