RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W CYB5P40312 120 aa3.42□□□□□ -1.86
VPS29YHR012W HIT1P46973 164 aa3.42□□□□□ -1.86
VPS29YHR012W APS2Q00381 147 aa3.42□□□□□ -1.86
VPS29YHR012W PBA1Q05778 276 aa3.42□□□□□ -1.86
VPS29YHR012W ATG33Q06485 197 aa3.42□□□□□ -1.86
VPS29YHR012W NAT3Q06504 195 aa3.42□□□□□ -1.86
VPS29YHR012W YLR042CQ07990 161 aa3.42□□□□□ -1.86
VPS29YHR012W TIM22Q12328 207 aa3.42□□□□□ -1.86
VPS29YHR012W YPR010C-AA5Z2X5 72 aa3.41□□□□□ -1.86
VPS29YHR012W RPL16BP26785 198 aaKnown RBP3.41□□□□□ -1.86
VPS29YHR012W AGA1P32323 725 aa3.41□□□□□ -1.86
VPS29YHR012W KRE9P39005 276 aa3.41□□□□□ -1.86
VPS29YHR012W YNL217WP40152 326 aa3.41□□□□□ -1.86
VPS29YHR012W ARL3Q02804 198 aa3.41□□□□□ -1.86
VPS29YHR012W RAV2Q03956 351 aa3.41□□□□□ -1.86
VPS29YHR012W DCN1Q12395 269 aa3.41□□□□□ -1.86
VPS29YHR012W YBR200W-AQ3E755 54 aa3.41□□□□□ -1.86
VPS29YHR012W YPL229WQ99395 206 aa3.41□□□□□ -1.86
VPS29YHR012W FRS1P15624 595 aaKnown RBP3.4□□□□□ -1.87
VPS29YHR012W YGL010WP25338 174 aa3.4□□□□□ -1.87
VPS29YHR012W SRP21P32342 167 aa3.4□□□□□ -1.87
VPS29YHR012W SSS1P35179 80 aa3.4□□□□□ -1.87
VPS29YHR012W MIX23P38162 196 aa3.4□□□□□ -1.87
VPS29YHR012W TEM1P38987 245 aa3.4□□□□□ -1.87
VPS29YHR012W YIL163CP40448 117 aa3.4□□□□□ -1.87
VPS29YHR012W ATP23P53722 227 aa3.4□□□□□ -1.87
VPS29YHR012W LCL2Q08045 131 aa3.4□□□□□ -1.87
VPS29YHR012W YOR105WQ08504 108 aa3.4□□□□□ -1.87
VPS29YHR012W SMT3Q12306 101 aaKnown RBP3.4□□□□□ -1.87
VPS29YHR012W KTI12P34253 313 aaKnown RBP3.39□□□□□ -1.87
VPS29YHR012W DAD2P36162 133 aa3.39□□□□□ -1.87
VPS29YHR012W YMR141CP40211 102 aa3.39□□□□□ -1.87
VPS29YHR012W LSM8P47093 109 aaKnown RBP3.39□□□□□ -1.87
VPS29YHR012W CGR1P53188 120 aa3.39□□□□□ -1.87
VPS29YHR012W ATP19P81451 68 aa3.39□□□□□ -1.87
VPS29YHR012W CUE4Q04201 117 aaPredicted RBP3.39□□□□□ -1.87
VPS29YHR012W YLL066W-BQ8TGJ7 56 aa3.39□□□□□ -1.87
VPS29YHR012W RPL33AP05744 107 aaKnown RBP3.38□□□□□ -1.87
VPS29YHR012W SVP26P38869 228 aa3.38□□□□□ -1.87
VPS29YHR012W SRP14P38985 146 aa3.38□□□□□ -1.87
VPS29YHR012W HUA1P40325 198 aa3.38□□□□□ -1.87
VPS29YHR012W RPL33BP41056 107 aaKnown RBP3.38□□□□□ -1.87
VPS29YHR012W YFR045WP43617 309 aa3.38□□□□□ -1.87
VPS29YHR012W YGR149WP48236 432 aa3.38□□□□□ -1.87
VPS29YHR012W PMP3P87284 55 aa3.38□□□□□ -1.87
VPS29YHR012W CYT2Q00873 224 aa3.38□□□□□ -1.87
VPS29YHR012W DPP1Q05521 289 aa3.38□□□□□ -1.87
VPS29YHR012W DGA1Q08650 418 aa3.38□□□□□ -1.87
VPS29YHR012W YNR034W-AQ3E841 98 aa3.38□□□□□ -1.87
VPS29YHR012W QRI5P32344 111 aa3.37□□□□□ -1.87
VPS29YHR012W YKL069WP36088 180 aa3.37□□□□□ -1.87
VPS29YHR012W YCL001W-BQ96VH2 84 aa3.37□□□□□ -1.87
VPS29YHR012W POR1P04840 283 aaKnown RBP3.36□□□□□ -1.87
VPS29YHR012W YDR034C-AP0C289 58 aa3.36□□□□□ -1.87
VPS29YHR012W HMRA1P0CY11 126 aa3.36□□□□□ -1.87
VPS29YHR012W TIR1P10863 254 aa3.36□□□□□ -1.87
VPS29YHR012W CUP2P15315 225 aa3.36□□□□□ -1.87
VPS29YHR012W YBR090CP38253 122 aa3.36□□□□□ -1.87
VPS29YHR012W SEN15Q04675 128 aa3.36□□□□□ -1.87
VPS29YHR012W CSM4Q08955 156 aa3.36□□□□□ -1.87
VPS29YHR012W DFM1Q12743 341 aaKnown RBP3.36□□□□□ -1.87
VPS29YHR012W YMR122W-AQ3E842 84 aa3.36□□□□□ -1.87
VPS29YHR012W YCR023CP25351 611 aa3.35□□□□□ -1.87
VPS29YHR012W PAM17P36147 197 aa3.35□□□□□ -1.87
VPS29YHR012W YHR140WP38842 239 aa3.35□□□□□ -1.87
VPS29YHR012W RPB11P38902 120 aa3.35□□□□□ -1.87
VPS29YHR012W OST3P48439 350 aa3.35□□□□□ -1.87
VPS29YHR012W BET5Q03630 159 aa3.35□□□□□ -1.87
VPS29YHR012W GIM5Q04493 163 aa3.35□□□□□ -1.87
VPS29YHR012W LSO2Q3E772 92 aaKnown RBP3.35□□□□□ -1.87
VPS29YHR012W RPS22BQ3E7Y3 130 aaKnown RBP3.35□□□□□ -1.87
VPS29YHR012W COA6Q3E846 104 aa3.35□□□□□ -1.87
VPS29YHR012W YAR023CD6VPM8 179 aa3.34□□□□□ -1.87
VPS29YHR012W RPL27AP0C2H6 136 aaKnown RBP3.34□□□□□ -1.87
VPS29YHR012W ERG28P40030 148 aa3.34□□□□□ -1.87
VPS29YHR012W ERV14P53173 138 aa3.34□□□□□ -1.87
VPS29YHR012W YGR017WP53210 297 aa3.34□□□□□ -1.87
VPS29YHR012W TVP18Q04767 167 aa3.34□□□□□ -1.87
VPS29YHR012W YIL134C-AQ45U18 67 aa3.34□□□□□ -1.87
VPS29YHR012W DIF1O13577 133 aa3.33□□□□□ -1.88
VPS29YHR012W RPL42AP0CX27 106 aaKnown RBP3.33□□□□□ -1.88
VPS29YHR012W RPL42BP0CX28 106 aaKnown RBP3.33□□□□□ -1.88
VPS29YHR012W UBC5P15732 148 aa3.33□□□□□ -1.88
VPS29YHR012W FZF1P32805 299 aa3.33□□□□□ -1.88
VPS29YHR012W MRPL11P36521 249 aaPredicted RBP3.33□□□□□ -1.88
VPS29YHR012W YCR024C-BQ3E7Z8 88 aa3.33□□□□□ -1.88
VPS29YHR012W MRPL31P14063 131 aaPredicted RBP3.32□□□□□ -1.88
VPS29YHR012W MRP49P32388 137 aa3.32□□□□□ -1.88
VPS29YHR012W ARC15P40518 154 aaRIP-Chip data3.32□□□□□ -1.88not detected
VPS29YHR012W SDS23P53172 527 aa3.32□□□□□ -1.88
VPS29YHR012W YDR115WQ04598 105 aa3.32□□□□□ -1.88
VPS29YHR012W YMR320WQ04897 101 aa3.32□□□□□ -1.88
VPS29YHR012W FCF1Q05498 189 aaPredicted RBP3.32□□□□□ -1.88
VPS29YHR012W ERG27Q12452 347 aaKnown RBP3.32□□□□□ -1.88
VPS29YHR012W RRT15Q3E811 62 aa3.32□□□□□ -1.88
VPS29YHR012W SEC4P07560 215 aaKnown RBP3.31□□□□□ -1.88
VPS29YHR012W FUN14P18411 198 aa3.31□□□□□ -1.88
VPS29YHR012W MRPL44P19956 98 aa3.31□□□□□ -1.88
VPS29YHR012W SCM4P32564 187 aa3.31□□□□□ -1.88
VPS29YHR012W ZRT1P32804 376 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 157.3 ms