RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	YOR186W	Q08560	144 aa		2.74	□□□□□ -1.97
ECO1	YFR027W	YLR365W	Q7LIF2	110 aa		2.74	□□□□□ -1.97
ECO1	YFR027W	BNI1	P41832	1953 aa		2.74	□□□□□ -1.97
ECO1	YFR027W	YHR139C-A	O13536	103 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	RPL23A	P0CX41	137 aa	Known RBP	2.73	□□□□□ -1.97
ECO1	YFR027W	RPL23B	P0CX42	137 aa	Known RBP	2.73	□□□□□ -1.97
ECO1	YFR027W	MRS3	P10566	314 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	TOM40	P23644	387 aa	Known RBP	2.73	□□□□□ -1.97
ECO1	YFR027W	REC114	P32841	428 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	CSE2	P33308	149 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	GGC1	P38988	300 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	PEX22	P39718	180 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	YNL217W	P40152	326 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	OST1	P41543	476 aa	Known RBP	2.73	□□□□□ -1.97
ECO1	YFR027W	TDA7	P53882	636 aa	Predicted RBP	2.73	□□□□□ -1.97
ECO1	YFR027W	GPI19	Q04082	140 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	YPS3	Q12303	508 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	YMR175W-A	Q3E766	64 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	YBR126W-A	Q8TGU7	68 aa		2.73	□□□□□ -1.97
ECO1	YFR027W	IMP1	P28627	190 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	IES6	P32617	166 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	TIM12	P32830	109 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	PAU7	P39545	55 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	YIL163C	P40448	117 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	CIS3	P47001	227 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	YDR209C	Q03480	137 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	YMR007W	Q03675	126 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	YDR102C	Q03864	110 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	MIM1	Q08176	113 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	MSA1	Q08471	629 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	RLM1	Q12224	676 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	YPR108W-A	Q3E7B3	70 aa		2.72	□□□□□ -1.97
ECO1	YFR027W	LAA1	P39526	2014 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	UBC4	P15731	148 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	YBR144C	P34215	104 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	YHR173C	P38864	112 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	MBB1	P39534	108 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	RRT13	P40042	185 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	YER079W	P40052	210 aa	Known RBP	2.71	□□□□□ -1.98
ECO1	YFR027W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.71	□□□□□ -1.98	not detected
ECO1	YFR027W	VPS55	P47111	140 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	YLR012C	Q07927	99 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	TIM18	Q08749	192 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	YDR381C-A	Q3E6R5	114 aa		2.71	□□□□□ -1.98
ECO1	YFR027W	YMR316C-A	I2HB70	103 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	BET1	P22804	142 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	RPL32	P38061	130 aa	Known RBP	2.7	□□□□□ -1.98
ECO1	YFR027W	SFT2	P38166	215 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	YAR029W	P39549	74 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	AIM19	P40502	157 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	MST27	P53176	234 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	YGR050C	P53231	118 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	HSK3	P69852	69 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	HAL1	Q01766	294 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	PPT2	Q12036	173 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	NCE102	Q12207	173 aa	RIP-Chip data	2.7	□□□□□ -1.98	not detected
ECO1	YFR027W	EMC6	Q12431	108 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	IGO2	Q9P305	131 aa		2.7	□□□□□ -1.98
ECO1	YFR027W	RPL15A	P05748	204 aa	Known RBP	2.69	□□□□□ -1.98
ECO1	YFR027W	PIS1	P06197	220 aa	Known RBP	2.69	□□□□□ -1.98
ECO1	YFR027W	RPS8A	P0CX39	200 aa	Known RBP	2.69	□□□□□ -1.98
ECO1	YFR027W	RPS8B	P0CX40	200 aa	Known RBP	2.69	□□□□□ -1.98
ECO1	YFR027W	MRPL31	P14063	131 aa	Predicted RBP	2.69	□□□□□ -1.98
ECO1	YFR027W	ROX3	P25046	220 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	RPL16B	P26785	198 aa	Known RBP	2.69	□□□□□ -1.98
ECO1	YFR027W	YSY6	P38374	65 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	MED6	P38782	295 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	SIM1	P40472	476 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	LST8	P41318	303 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	YFR054C	P43622	192 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	UBC13	P52490	153 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	VEL1	P53058	206 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	MIX14	Q04341	121 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	GAT3	Q07928	141 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	HUG1	Q6Q5K6	68 aa		2.69	□□□□□ -1.98
ECO1	YFR027W	RPL18A	P0CX49	186 aa	Known RBP	2.68	□□□□□ -1.98
ECO1	YFR027W	RPL18B	P0CX50	186 aa	Known RBP	2.68	□□□□□ -1.98
ECO1	YFR027W	HSP12	P22943	109 aa	Known RBP	2.68	□□□□□ -1.98
ECO1	YFR027W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.68	□□□□□ -1.98	not detected
ECO1	YFR027W	YFL051C	P43552	160 aa		2.68	□□□□□ -1.98
ECO1	YFR027W	IRC23	Q08416	157 aa		2.68	□□□□□ -1.98
ECO1	YFR027W	RRS1	Q08746	203 aa	Known RBP	2.68	□□□□□ -1.98
ECO1	YFR027W	YPR064W	Q12492	139 aa		2.68	□□□□□ -1.98
ECO1	YFR027W	PFY1	P07274	126 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	FPR2	P32472	135 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	CTR2	P38865	189 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	TIM17	P39515	158 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	YER187W	P40102	141 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	PEX17	P40155	199 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	YIA6	P40556	373 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	NCA3	P46955	337 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	YNR077C	P53758	84 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	PET191	Q02772	108 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	MGR2	Q02889	113 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	PIR1	Q03178	341 aa		2.67	□□□□□ -1.98
ECO1	YFR027W	RPL30	P14120	105 aa	Known RBP	2.66	□□□□□ -1.98
ECO1	YFR027W	SPT4	P32914	102 aa	Predicted RBP	2.66	□□□□□ -1.98
ECO1	YFR027W	DSE2	P38844	325 aa		2.66	□□□□□ -1.98
ECO1	YFR027W	YHR180W	P38868	163 aa		2.66	□□□□□ -1.98
ECO1	YFR027W	KRE9	P39005	276 aa		2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms