RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W QCR7P00128 127 aa0.26□□□□□ -2.37
YCK3YER123W UBC4P15731 148 aa0.26□□□□□ -2.37
YCK3YER123W IDP1P21954 428 aaKnown RBP0.26□□□□□ -2.37
YCK3YER123W PRE1P22141 198 aaKnown RBP0.26□□□□□ -2.37
YCK3YER123W NSA2P40078 261 aaKnown RBP0.26□□□□□ -2.37
YCK3YER123W RFC2P40348 353 aa0.26□□□□□ -2.37
YCK3YER123W YGR025WP53216 100 aa0.26□□□□□ -2.37
YCK3YER123W AIM34Q03673 198 aa0.26□□□□□ -2.37
YCK3YER123W GRX3Q03835 250 aa0.26□□□□□ -2.37
YCK3YER123W FIT1Q04433 528 aa0.26□□□□□ -2.37
YCK3YER123W YMR315WQ04869 349 aaKnown RBP0.26□□□□□ -2.37
YCK3YER123W RNH202Q05635 350 aa0.26□□□□□ -2.37
YCK3YER123W YOR015WQ12169 119 aa0.26□□□□□ -2.37
YCK3YER123W MHF2Q3E829 80 aa0.26□□□□□ -2.37
YCK3YER123W RPL22AP05749 121 aaKnown RBP0.25□□□□□ -2.37
YCK3YER123W RPS11AP0CX47 156 aaKnown RBP0.25□□□□□ -2.37
YCK3YER123W RPS11BP0CX48 156 aaKnown RBP0.25□□□□□ -2.37
YCK3YER123W UBC8P28263 218 aa0.25□□□□□ -2.37
YCK3YER123W UGX2P32772 223 aa0.25□□□□□ -2.37
YCK3YER123W ARC19P33204 171 aaKnown RBP0.25□□□□□ -2.37
YCK3YER123W CPR5P35176 225 aa0.25□□□□□ -2.37
YCK3YER123W GPI14P47088 403 aaKnown RBP0.25□□□□□ -2.37
YCK3YER123W YGL235WP53071 178 aa0.25□□□□□ -2.37
YCK3YER123W YNL184CP53876 108 aa0.25□□□□□ -2.37
YCK3YER123W HSK3P69852 69 aa0.25□□□□□ -2.37
YCK3YER123W YKR005CQ02203 525 aa0.25□□□□□ -2.37
YCK3YER123W VPS28Q02767 242 aa0.25□□□□□ -2.37
YCK3YER123W DML1Q03652 475 aa0.25□□□□□ -2.37
YCK3YER123W YPR127WQ06494 345 aa0.25□□□□□ -2.37
YCK3YER123W NAT3Q06504 195 aa0.25□□□□□ -2.37
YCK3YER123W HRD1Q08109 551 aa0.25□□□□□ -2.37
YCK3YER123W YDR029WQ12111 104 aa0.25□□□□□ -2.37
YCK3YER123W YOS1Q3E834 85 aa0.25□□□□□ -2.37
YCK3YER123W RIB3Q99258 208 aa0.25□□□□□ -2.37
YCK3YER123W YBL010CP32788 280 aa0.24□□□□□ -2.37
YCK3YER123W YBR242WP38331 238 aa0.24□□□□□ -2.37
YCK3YER123W SNU13P39990 126 aaKnown RBP0.24□□□□□ -2.37
YCK3YER123W DCV1P43595 202 aa0.24□□□□□ -2.37
YCK3YER123W NRK1P53915 240 aa0.24□□□□□ -2.37
YCK3YER123W YLR412C-AQ3E742 68 aa0.24□□□□□ -2.37
YCK3YER123W MED11Q99278 115 aa0.24□□□□□ -2.37
YCK3YER123W PDX3P38075 228 aaKnown RBP0.23□□□□□ -2.37
YCK3YER123W YFL019CP43576 117 aa0.23□□□□□ -2.37
YCK3YER123W PGA1P53896 198 aa0.23□□□□□ -2.37
YCK3YER123W GIM3P53900 129 aa0.23□□□□□ -2.37
YCK3YER123W SNO1Q03144 224 aa0.23□□□□□ -2.37
YCK3YER123W ATG38Q05789 226 aaKnown RBP0.23□□□□□ -2.37
YCK3YER123W SHH4Q06236 168 aa0.23□□□□□ -2.37
YCK3YER123W YPR203WQ08994 102 aa0.23□□□□□ -2.37
YCK3YER123W ATG41Q12048 136 aa0.23□□□□□ -2.37
YCK3YER123W DAS2Q12084 232 aa0.23□□□□□ -2.37
YCK3YER123W YCR075W-AQ3E830 75 aa0.23□□□□□ -2.37
YCK3YER123W RAD6P06104 172 aa0.23□□□□□ -2.37
YCK3YER123W CMD1P06787 147 aaKnown RBP0.23□□□□□ -2.37
YCK3YER123W BUB2P26448 306 aaPredicted RBP0.23□□□□□ -2.37
YCK3YER123W RRT1P38192 103 aa0.23□□□□□ -2.37
YCK3YER123W SHG1P38337 142 aa0.23□□□□□ -2.37
YCK3YER123W VMA10P48836 114 aaKnown RBP0.23□□□□□ -2.37
YCK3YER123W MPC1P53157 130 aaKnown RBP0.23□□□□□ -2.37
YCK3YER123W YIP3P53633 176 aa0.23□□□□□ -2.37
YCK3YER123W YDR210WQ03482 75 aa0.23□□□□□ -2.37
YCK3YER123W YET3Q07451 203 aa0.23□□□□□ -2.37
YCK3YER123W YPD1Q07688 167 aa0.23□□□□□ -2.37
YCK3YER123W YOL131WQ08270 108 aa0.23□□□□□ -2.37
YCK3YER123W YOR072WQ08486 104 aa0.23□□□□□ -2.37
YCK3YER123W YDL157CQ12082 118 aa0.23□□□□□ -2.37
YCK3YER123W ATP20Q12233 115 aa0.23□□□□□ -2.37
YCK3YER123W YOR192C-CQ3E736 78 aa0.23□□□□□ -2.37
YCK3YER123W ADK1P07170 222 aaKnown RBP0.22□□□□□ -2.37
YCK3YER123W SRP102P36057 244 aaPredicted RBP0.22□□□□□ -2.37
YCK3YER123W YPT31P38555 223 aaKnown RBP0.22□□□□□ -2.37
YCK3YER123W SEC72P39742 193 aaKnown RBP0.22□□□□□ -2.37
YCK3YER123W CCS1P40202 249 aaKnown RBP0.22□□□□□ -2.37
YCK3YER123W CIN5P40917 295 aa0.22□□□□□ -2.37
YCK3YER123W NSE4P43124 402 aa0.22□□□□□ -2.37
YCK3YER123W YML079WQ03629 201 aa0.22□□□□□ -2.37
YCK3YER123W PLP1Q04004 230 aa0.22□□□□□ -2.37
YCK3YER123W GAL83Q04739 417 aa0.22□□□□□ -2.37
YCK3YER123W RRT7Q07829 113 aa0.22□□□□□ -2.37
YCK3YER123W CCW12Q12127 133 aa0.22□□□□□ -2.37
YCK3YER123W HUT1Q12520 339 aa0.22□□□□□ -2.37
YCK3YER123W COA2Q3E823 68 aa0.22□□□□□ -2.37
YCK3YER123W COA6Q3E846 104 aa0.22□□□□□ -2.37
YCK3YER123W RPL33AP05744 107 aaKnown RBP0.21□□□□□ -2.38
YCK3YER123W FUN14P18411 198 aa0.21□□□□□ -2.38
YCK3YER123W RPS1BP23248 255 aaKnown RBP0.21□□□□□ -2.38
YCK3YER123W AHC2P25649 128 aa0.21□□□□□ -2.38
YCK3YER123W NHP2P32495 156 aaPredicted RBP0.21□□□□□ -2.38
YCK3YER123W ETR1P38071 380 aa0.21□□□□□ -2.38
YCK3YER123W HTD2P38790 280 aaKnown RBP0.21□□□□□ -2.38
YCK3YER123W IPT1P38954 527 aa0.21□□□□□ -2.38
YCK3YER123W SRP14P38985 146 aa0.21□□□□□ -2.38
YCK3YER123W MPM1P40364 252 aa0.21□□□□□ -2.38
YCK3YER123W POR2P40478 281 aa0.21□□□□□ -2.38
YCK3YER123W EMC5P40540 141 aa0.21□□□□□ -2.38
YCK3YER123W LST8P41318 303 aa0.21□□□□□ -2.38
YCK3YER123W YGL101WP53144 215 aa0.21□□□□□ -2.38
YCK3YER123W JAC1P53193 184 aa0.21□□□□□ -2.38
YCK3YER123W ATP19P81451 68 aa0.21□□□□□ -2.38
YCK3YER123W TMA20P89886 181 aaPredicted RBP0.21□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 114.6 ms