RNA–Protein interactions for RNA: YDR111C

ALT2, Transcript of Catalytically inactive alanine transaminase, yeast

Gene ALT2, Length 1,524 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ALT2	YDR111C	LPP1	Q04396	274 aa		4.92	□□□□□ -1.62
ALT2	YDR111C	MCH4	Q08268	501 aa		4.92	□□□□□ -1.62
ALT2	YDR111C	YHR214C-E	Q8TGK0	99 aa		4.92	□□□□□ -1.62
ALT2	YDR111C	YBL059W	P34224	193 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	TIM17	P39515	158 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	YNL195C	P40168	261 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	YFR035C	P43608	114 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	CIS3	P47001	227 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	UBC13	P52490	153 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	LSM6	Q06406	86 aa	Known RBP	4.91	□□□□□ -1.62
ALT2	YDR111C	YDL211C	Q12121	372 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	SUT2	Q12286	268 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	YLR365W	Q7LIF2	110 aa		4.91	□□□□□ -1.62
ALT2	YDR111C	RNQ1	P25367	405 aa		4.9	□□□□□ -1.63
ALT2	YDR111C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
ALT2	YDR111C	RPP1	P38786	293 aa		4.9	□□□□□ -1.63
ALT2	YDR111C	USV1	Q12132	391 aa		4.9	□□□□□ -1.63
ALT2	YDR111C	AYT1	Q12226	474 aa		4.9	□□□□□ -1.63
ALT2	YDR111C	UBR2	Q07963	1872 aa		4.9	□□□□□ -1.63
ALT2	YDR111C	RPS22A	P0C0W1	130 aa	Known RBP	4.89	□□□□□ -1.63
ALT2	YDR111C	YHR213W	P0CI67	198 aa		4.89	□□□□□ -1.63
ALT2	YDR111C	LAA1	P39526	2014 aa		4.89	□□□□□ -1.63
ALT2	YDR111C	MRPL31	P14063	131 aa	Predicted RBP	4.88	□□□□□ -1.63
ALT2	YDR111C	RPB9	P27999	122 aa		4.88	□□□□□ -1.63
ALT2	YDR111C	YKR045C	P36138	183 aa		4.88	□□□□□ -1.63
ALT2	YDR111C	BRP1	P53194	125 aa		4.88	□□□□□ -1.63
ALT2	YDR111C	YGR050C	P53231	118 aa		4.88	□□□□□ -1.63
ALT2	YDR111C	SWT21	P53873	357 aa	Predicted RBP	4.88	□□□□□ -1.63
ALT2	YDR111C	Q0010	Q9ZZX9	128 aa		4.88	□□□□□ -1.63
ALT2	YDR111C	HKR1	P41809	1802 aa		4.88	□□□□□ -1.63
ALT2	YDR111C	HUR1	P45820	110 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	VPS55	P47111	140 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	YGR018C	P53211	109 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	PIR1	Q03178	341 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	YML100W-A	Q8TGT0	57 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	RPL32	P38061	130 aa	Known RBP	4.87	□□□□□ -1.63
ALT2	YDR111C	YER187W	P40102	141 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	VPS25	P47142	202 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	PIR3	Q03180	325 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	NPC2	Q12408	173 aa		4.87	□□□□□ -1.63
ALT2	YDR111C	SOD1	P00445	154 aa	Known RBP	4.86	□□□□□ -1.63
ALT2	YDR111C	RPL11A	P0C0W9	174 aa	Known RBP	4.86	□□□□□ -1.63
ALT2	YDR111C	IMP1	P28627	190 aa		4.86	□□□□□ -1.63
ALT2	YDR111C	AGA2	P32781	87 aa		4.86	□□□□□ -1.63
ALT2	YDR111C	RSM18	P40033	138 aa		4.86	□□□□□ -1.63
ALT2	YDR111C	LEE1	Q02799	301 aa	Known RBP	4.86	□□□□□ -1.63
ALT2	YDR111C	YDL242W	Q07746	117 aa		4.86	□□□□□ -1.63
ALT2	YDR111C	RPL11B	Q3E757	174 aa	Predicted RBP	4.86	□□□□□ -1.63
ALT2	YDR111C	RRT15	Q3E811	62 aa		4.86	□□□□□ -1.63
ALT2	YDR111C	ROX3	P25046	220 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	YHR180W	P38868	163 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	SIM1	P40472	476 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	KEG1	P43614	200 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	ICY1	Q04329	127 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	YOR186W	Q08560	144 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	NCE102	Q12207	173 aa	RIP-Chip data	4.85	□□□□□ -1.63	not detected
ALT2	YDR111C	SMT3	Q12306	101 aa	Known RBP	4.85	□□□□□ -1.63
ALT2	YDR111C	NAG1	Q8TGN9	163 aa		4.85	□□□□□ -1.63
ALT2	YDR111C	YSY6	P38374	65 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	YHL005C	P38752	130 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	YFL019C	P43576	117 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	SWS2	P53937	143 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	SLG1	P54867	378 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	YHP1	Q04116	353 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	YOR376W-A	Q3E805	51 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	TDA8	Q6B2U8	126 aa		4.84	□□□□□ -1.63
ALT2	YDR111C	YAL064W-B	O13512	126 aa		4.83	□□□□□ -1.64
ALT2	YDR111C	SPS100	P13130	326 aa		4.83	□□□□□ -1.64
ALT2	YDR111C	LDB16	P25587	256 aa		4.83	□□□□□ -1.64
ALT2	YDR111C	MTC7	P32633	139 aa		4.83	□□□□□ -1.64
ALT2	YDR111C	JJJ3	P47138	172 aa		4.83	□□□□□ -1.64
ALT2	YDR111C	YIL014C-A	Q02598	104 aa		4.83	□□□□□ -1.64
ALT2	YDR111C	RPL42A	P0CX27	106 aa	Known RBP	4.82	□□□□□ -1.64
ALT2	YDR111C	RPL42B	P0CX28	106 aa	Known RBP	4.82	□□□□□ -1.64
ALT2	YDR111C	TDA2	P40045	126 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	AIM19	P40502	157 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	YMR181C	Q03231	154 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	YMR295C	Q03559	197 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	FLO9	P39712	1322 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	CCH1	P50077	2039 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	FPR2	P32472	135 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	YNL217W	P40152	326 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	ICS3	P47034	131 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	BOL2	P53082	120 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	MIM1	Q08176	113 aa		4.82	□□□□□ -1.64
ALT2	YDR111C	HHF1	P02309	103 aa	Known RBP	4.81	□□□□□ -1.64
ALT2	YDR111C	RPL15A	P05748	204 aa	Known RBP	4.81	□□□□□ -1.64
ALT2	YDR111C	YHR214C-D	P0CX93	97 aa		4.81	□□□□□ -1.64
ALT2	YDR111C	YEL045C	P32616	141 aa		4.81	□□□□□ -1.64
ALT2	YDR111C	SPI1	P40092	148 aa		4.81	□□□□□ -1.64
ALT2	YDR111C	YNL200C	P40165	246 aa	Known RBP	4.81	□□□□□ -1.64
ALT2	YDR111C	RPL15B	P54780	204 aa	Predicted RBP	4.81	□□□□□ -1.64
ALT2	YDR111C	YLR012C	Q07927	99 aa		4.81	□□□□□ -1.64
ALT2	YDR111C	PMD1	P32634	1753 aa		4.8	□□□□□ -1.64
ALT2	YDR111C	YCR025C	P25352	136 aa		4.8	□□□□□ -1.64
ALT2	YDR111C	CTR2	P38865	189 aa		4.8	□□□□□ -1.64
ALT2	YDR111C	WWM1	P43582	211 aa	Known RBP	4.8	□□□□□ -1.64
ALT2	YDR111C	ECO1	P43605	281 aa		4.8	□□□□□ -1.64
ALT2	YDR111C	SPG3	Q04398	127 aa	Predicted RBP	4.8	□□□□□ -1.64
ALT2	YDR111C	YOR343C	Q12484	108 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 63.2 ms