RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C PIR3Q03180 325 aa0.89□□□□□ -2.27
VAM6YDL077C YDR029WQ12111 104 aa0.89□□□□□ -2.27
VAM6YDL077C YGL258W-AQ3E740 77 aa0.89□□□□□ -2.27
VAM6YDL077C KSH1Q8TGJ3 72 aa0.89□□□□□ -2.27
VAM6YDL077C YPL229WQ99395 206 aa0.89□□□□□ -2.27
VAM6YDL077C YHR213WP0CI67 198 aa0.88□□□□□ -2.27
VAM6YDL077C RPL20AP0CX23 172 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C RPL20BP0CX24 172 aaPredicted RBP0.88□□□□□ -2.27
VAM6YDL077C MRS3P10566 314 aa0.88□□□□□ -2.27
VAM6YDL077C ERG2P32352 222 aa0.88□□□□□ -2.27
VAM6YDL077C AGA2P32781 87 aa0.88□□□□□ -2.27
VAM6YDL077C FZF1P32805 299 aa0.88□□□□□ -2.27
VAM6YDL077C SIM1P40472 476 aa0.88□□□□□ -2.27
VAM6YDL077C YPI1P43587 155 aa0.88□□□□□ -2.27
VAM6YDL077C DCV1P43595 202 aa0.88□□□□□ -2.27
VAM6YDL077C YGL193CP53097 103 aa0.88□□□□□ -2.27
VAM6YDL077C MOT3P54785 490 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C SPG3Q04398 127 aaPredicted RBP0.88□□□□□ -2.27
VAM6YDL077C YLR112WQ12130 139 aa0.88□□□□□ -2.27
VAM6YDL077C YKL183C-AQ3E765 70 aa0.88□□□□□ -2.27
VAM6YDL077C YMR316C-AI2HB70 103 aa0.88□□□□□ -2.27
VAM6YDL077C YHR139C-AO13536 103 aa0.88□□□□□ -2.27
VAM6YDL077C HSP12P22943 109 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C MXR2P25566 168 aa0.88□□□□□ -2.27
VAM6YDL077C YCR050CP25630 102 aa0.88□□□□□ -2.27
VAM6YDL077C IMP1P28627 190 aa0.88□□□□□ -2.27
VAM6YDL077C MTC7P32633 139 aa0.88□□□□□ -2.27
VAM6YDL077C MOH1P38191 138 aa0.88□□□□□ -2.27
VAM6YDL077C SFT1P43682 97 aa0.88□□□□□ -2.27
VAM6YDL077C YGR050CP53231 118 aa0.88□□□□□ -2.27
VAM6YDL077C MET31Q03081 177 aa0.88□□□□□ -2.27
VAM6YDL077C YOR186WQ08560 144 aa0.88□□□□□ -2.27
VAM6YDL077C POC4Q12245 148 aaPredicted RBP0.88□□□□□ -2.27
VAM6YDL077C YOR343CQ12484 108 aa0.88□□□□□ -2.27
VAM6YDL077C YLR342W-AQ3E810 57 aa0.88□□□□□ -2.27
VAM6YDL077C YCL021W-AQ96VH3 125 aa0.88□□□□□ -2.27
VAM6YDL077C YAL065CO13511 128 aa0.88□□□□□ -2.27
VAM6YDL077C RPL2AP0CX45 254 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C RPL2BP0CX46 254 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C MRPL31P14063 131 aaPredicted RBP0.88□□□□□ -2.27
VAM6YDL077C SPT4P32914 102 aaPredicted RBP0.88□□□□□ -2.27
VAM6YDL077C KTI12P34253 313 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C YHR140WP38842 239 aa0.88□□□□□ -2.27
VAM6YDL077C PET8P38921 284 aa0.88□□□□□ -2.27
VAM6YDL077C ELO1P39540 310 aa0.88□□□□□ -2.27
VAM6YDL077C YEL073CP39974 107 aa0.88□□□□□ -2.27
VAM6YDL077C NAS2P40555 220 aa0.88□□□□□ -2.27
VAM6YDL077C YFR054CP43622 192 aa0.88□□□□□ -2.27
VAM6YDL077C PGU1P47180 361 aa0.88□□□□□ -2.27
VAM6YDL077C RCR2Q03446 210 aaKnown RBP0.88□□□□□ -2.27
VAM6YDL077C YHP1Q04116 353 aa0.88□□□□□ -2.27
VAM6YDL077C YMR254CQ04838 102 aa0.88□□□□□ -2.27
VAM6YDL077C YOL118CQ08259 102 aa0.88□□□□□ -2.27
VAM6YDL077C YOR387CQ08910 206 aa0.88□□□□□ -2.27
VAM6YDL077C EMC6Q12431 108 aa0.88□□□□□ -2.27
VAM6YDL077C YOR314WQ12506 109 aa0.88□□□□□ -2.27
VAM6YDL077C CCH1P50077 2039 aa0.87□□□□□ -2.27
VAM6YDL077C DIF1O13577 133 aa0.87□□□□□ -2.27
VAM6YDL077C QCR8P08525 94 aa0.87□□□□□ -2.27
VAM6YDL077C RPS21AP0C0V8 87 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C RPL18AP0CX49 186 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C RPL18BP0CX50 186 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C MRPL39P36533 70 aa0.87□□□□□ -2.27
VAM6YDL077C YHL037CP38733 133 aa0.87□□□□□ -2.27
VAM6YDL077C YHR022CP38763 256 aa0.87□□□□□ -2.27
VAM6YDL077C MPC2P38857 129 aa0.87□□□□□ -2.27
VAM6YDL077C RPS26AP39938 119 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C RPS26BP39939 119 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C YER079WP40052 210 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C GAT4P40569 121 aa0.87□□□□□ -2.27
VAM6YDL077C HUR1P45820 110 aa0.87□□□□□ -2.27
VAM6YDL077C NCA3P46955 337 aa0.87□□□□□ -2.27
VAM6YDL077C UBC11P52492 156 aa0.87□□□□□ -2.27
VAM6YDL077C YGR219WP53307 113 aa0.87□□□□□ -2.27
VAM6YDL077C HRT1Q08273 121 aa0.87□□□□□ -2.27
VAM6YDL077C TIM18Q08749 192 aa0.87□□□□□ -2.27
VAM6YDL077C NIP7Q08962 181 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C YPR011CQ12251 326 aa0.87□□□□□ -2.27
VAM6YDL077C PRM7Q12459 698 aa0.87□□□□□ -2.27
VAM6YDL077C YOR020W-AQ3E824 90 aa0.87□□□□□ -2.27
VAM6YDL077C PAM17P36147 197 aa0.87□□□□□ -2.27
VAM6YDL077C RRT13P40042 185 aa0.87□□□□□ -2.27
VAM6YDL077C CWP2P43497 92 aa0.87□□□□□ -2.27
VAM6YDL077C CIS3P47001 227 aa0.87□□□□□ -2.27
VAM6YDL077C YGL034CP53186 121 aa0.87□□□□□ -2.27
VAM6YDL077C PCP1P53259 346 aa0.87□□□□□ -2.27
VAM6YDL077C NRG1Q03125 231 aa0.87□□□□□ -2.27
VAM6YDL077C PIR1Q03178 341 aa0.87□□□□□ -2.27
VAM6YDL077C IRC19Q07843 230 aa0.87□□□□□ -2.27
VAM6YDL077C IRC23Q08416 157 aa0.87□□□□□ -2.27
VAM6YDL077C MDN1Q12019 4910 aaKnown RBP0.87□□□□□ -2.27
VAM6YDL077C BET1P22804 142 aa0.86□□□□□ -2.27
VAM6YDL077C REC104P33323 182 aa0.86□□□□□ -2.27
VAM6YDL077C RPL32P38061 130 aaKnown RBP0.86□□□□□ -2.27
VAM6YDL077C SWD3P38123 315 aa0.86□□□□□ -2.27
VAM6YDL077C YAR029WP39549 74 aa0.86□□□□□ -2.27
VAM6YDL077C YFR057WP43625 151 aa0.86□□□□□ -2.27
VAM6YDL077C GLO1P50107 326 aa0.86□□□□□ -2.27
VAM6YDL077C SWS2P53937 143 aa0.86□□□□□ -2.27
VAM6YDL077C INP1Q03694 420 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms