RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	YCR006C	P25350	157 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	IMP1	P28627	190 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	GPI18	P38211	433 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	CIS3	P47001	227 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	YMR103C	Q04436	120 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	DAD1	Q12248	94 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	SUT2	Q12286	268 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	YHR139C-A	O13536	103 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	Q0255	P03881	472 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	PIS1	P06197	220 aa	Known RBP	4.97	□□□□□ -1.61
RSA4	YCR072C	YCR050C	P25630	102 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	FZF1	P32805	299 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	FIP1	P45976	327 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	VPS55	P47111	140 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	YMR320W	Q04897	101 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	YLR042C	Q07990	161 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	YLR412C-A	Q3E742	68 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	YPL038W-A	Q3E7B4	63 aa		4.97	□□□□□ -1.61
RSA4	YCR072C	RPL2A	P0CX45	254 aa	Known RBP	4.96	□□□□□ -1.62
RSA4	YCR072C	RPL2B	P0CX46	254 aa	Known RBP	4.96	□□□□□ -1.62
RSA4	YCR072C	SMP1	P38128	452 aa		4.96	□□□□□ -1.62
RSA4	YCR072C	YOR343C	Q12484	108 aa		4.96	□□□□□ -1.62
RSA4	YCR072C	SWD3	P38123	315 aa		4.95	□□□□□ -1.62
RSA4	YCR072C	ARF1	P11076	181 aa	Known RBP	4.94	□□□□□ -1.62
RSA4	YCR072C	HSP12	P22943	109 aa	Known RBP	4.94	□□□□□ -1.62
RSA4	YCR072C	SVP26	P38869	228 aa		4.94	□□□□□ -1.62
RSA4	YCR072C	YNR077C	P53758	84 aa		4.94	□□□□□ -1.62
RSA4	YCR072C	GPI19	Q04082	140 aa		4.94	□□□□□ -1.62
RSA4	YCR072C	TRP1	P00912	224 aa		4.93	□□□□□ -1.62
RSA4	YCR072C	YHL018W	P38744	120 aa	Predicted RBP	4.93	□□□□□ -1.62
RSA4	YCR072C	YLR111W	Q12528	110 aa		4.93	□□□□□ -1.62
RSA4	YCR072C	ROX3	P25046	220 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	DSE2	P38844	325 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	PET8	P38921	284 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YEL067C	P39978	195 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YNL217W	P40152	326 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YNL208W	P40159	199 aa	Known RBP	4.92	□□□□□ -1.62
RSA4	YCR072C	YGR164W	P53291	111 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	NCE101	Q02820	53 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YML122C	Q03207	126 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	SDC1	Q03323	175 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	API2	Q04413	109 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	SHH4	Q06236	168 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YOL118C	Q08259	102 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	FIT2	Q08906	153 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YLR112W	Q12130	139 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	BOL1	Q3E793	110 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	MRS3	P10566	314 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	RPL30	P14120	105 aa	Known RBP	4.92	□□□□□ -1.62
RSA4	YCR072C	HUA1	P40325	198 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	OST1	P41543	476 aa	Known RBP	4.92	□□□□□ -1.62
RSA4	YCR072C	NCA3	P46955	337 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	PCP1	P53259	346 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YDR209C	Q03480	137 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YMR317W	Q04893	1140 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YPL261C	Q08976	102 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YOR192C-C	Q3E736	78 aa		4.92	□□□□□ -1.62
RSA4	YCR072C	YFL051C	P43552	160 aa		4.91	□□□□□ -1.62
RSA4	YCR072C	TOM7	P53507	60 aa		4.91	□□□□□ -1.62
RSA4	YCR072C	MIX14	Q04341	121 aa		4.91	□□□□□ -1.62
RSA4	YCR072C	KSH1	Q8TGJ3	72 aa		4.91	□□□□□ -1.62
RSA4	YCR072C	RPS8A	P0CX39	200 aa	Known RBP	4.9	□□□□□ -1.63
RSA4	YCR072C	RPS8B	P0CX40	200 aa	Known RBP	4.9	□□□□□ -1.63
RSA4	YCR072C	TOM40	P23644	387 aa	Known RBP	4.9	□□□□□ -1.63
RSA4	YCR072C	GLE2	P40066	365 aa		4.9	□□□□□ -1.63
RSA4	YCR072C	UBC13	P52490	153 aa		4.9	□□□□□ -1.63
RSA4	YCR072C	MST27	P53176	234 aa		4.9	□□□□□ -1.63
RSA4	YCR072C	HNT3	Q08702	217 aa		4.9	□□□□□ -1.63
RSA4	YCR072C	FMP46	P36141	133 aa	Known RBP	4.89	□□□□□ -1.63
RSA4	YCR072C	SIM1	P40472	476 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	YFR054C	P43622	192 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	YHP1	Q04116	353 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	GAT3	Q07928	141 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	YDR381C-A	Q3E6R5	114 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	YGL258W-A	Q3E740	77 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	YHR214C-E	Q8TGK0	99 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	IGO2	Q9P305	131 aa		4.89	□□□□□ -1.63
RSA4	YCR072C	RPL28	P02406	149 aa	Known RBP	4.88	□□□□□ -1.63
RSA4	YCR072C	YKR032W	P36127	104 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	RRT13	P40042	185 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	YIA6	P40556	373 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	YFL015C	P43578	164 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	SFT1	P43682	97 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	MGR2	Q02889	113 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	IRC19	Q07843	230 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	YMR175W-A	Q3E766	64 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	YNL277W-A	Q3E7Z0	62 aa		4.88	□□□□□ -1.63
RSA4	YCR072C	AQY1	P0CD91	305 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	PBI2	P0CT04	75 aa	Known RBP	4.87	□□□□□ -1.63
RSA4	YCR072C	FPR2	P32472	135 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	SWS2	P53937	143 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	IRC23	Q08416	157 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	VPS68	Q12016	184 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	TIM22	Q12328	207 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	CDC39	P25655	2108 aa	Known RBP	4.87	□□□□□ -1.63
RSA4	YCR072C	MDM35	O60200	86 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	YDL022C-A	P0C5L6	82 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	YGR219W	P53307	113 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	YDR102C	Q03864	110 aa		4.87	□□□□□ -1.63
RSA4	YCR072C	YMR254C	Q04838	102 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms