RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W YBR126W-AQ8TGU7 68 aa6.18□□□□□ -1.42
VBA3YCL069W RPS11AP0CX47 156 aaKnown RBP6.17□□□□□ -1.42
VBA3YCL069W RPS11BP0CX48 156 aaKnown RBP6.17□□□□□ -1.42
VBA3YCL069W YRA2P36036 203 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
VBA3YCL069W PAU5P43575 122 aa6.17□□□□□ -1.42
VBA3YCL069W YGR017WP53210 297 aa6.17□□□□□ -1.42
VBA3YCL069W MHR1Q06630 226 aa6.17□□□□□ -1.42
VBA3YCL069W WIP1Q2V2P8 89 aa6.17□□□□□ -1.42
VBA3YCL069W VAR1P02381 398 aa6.16□□□□□ -1.42
VBA3YCL069W RPL12AP0CX53 165 aaKnown RBP6.16□□□□□ -1.42
VBA3YCL069W RPL12BP0CX54 165 aa6.16□□□□□ -1.42
VBA3YCL069W AGA1P32323 725 aa6.16□□□□□ -1.42
VBA3YCL069W AIM29P36154 155 aa6.16□□□□□ -1.42
VBA3YCL069W KEG1P43614 200 aa6.16□□□□□ -1.42
VBA3YCL069W UPS3Q04006 179 aa6.16□□□□□ -1.42
VBA3YCL069W Q0255P03881 472 aa6.15□□□□□ -1.43
VBA3YCL069W RPL2AP0CX45 254 aaKnown RBP6.15□□□□□ -1.43
VBA3YCL069W RPL2BP0CX46 254 aaKnown RBP6.15□□□□□ -1.43
VBA3YCL069W HMRA1P0CY11 126 aa6.15□□□□□ -1.43
VBA3YCL069W RDS3Q06835 107 aaPredicted RBP6.15□□□□□ -1.43
VBA3YCL069W GTT1P40582 234 aa6.14□□□□□ -1.43
VBA3YCL069W THG1P53215 237 aaKnown RBP6.14□□□□□ -1.43
VBA3YCL069W YGR026WP53217 278 aa6.14□□□□□ -1.43
VBA3YCL069W SCW10Q04951 389 aa6.14□□□□□ -1.43
VBA3YCL069W YCR001WP25347 104 aa6.13□□□□□ -1.43
VBA3YCL069W IRC22P40006 225 aa6.13□□□□□ -1.43
VBA3YCL069W YBR200W-AQ3E755 54 aa6.13□□□□□ -1.43
VBA3YCL069W RPL16BP26785 198 aaKnown RBP6.12□□□□□ -1.43
VBA3YCL069W VHS2P40463 436 aa6.12□□□□□ -1.43
VBA3YCL069W SDS23P53172 527 aa6.12□□□□□ -1.43
VBA3YCL069W ARL3Q02804 198 aa6.12□□□□□ -1.43
VBA3YCL069W YHR140WP38842 239 aa6.11□□□□□ -1.43
VBA3YCL069W YPL080CQ02826 108 aa6.11□□□□□ -1.43
VBA3YCL069W ARC18Q05933 178 aaKnown RBP6.11□□□□□ -1.43
VBA3YCL069W PAU19P0CE85 124 aa6.1□□□□□ -1.43
VBA3YCL069W PAU21P0CE86 164 aa6.1□□□□□ -1.43
VBA3YCL069W PAU22P0CE87 164 aa6.1□□□□□ -1.43
VBA3YCL069W PAU3P25610 124 aa6.1□□□□□ -1.43
VBA3YCL069W ZRT1P32804 376 aa6.1□□□□□ -1.43
VBA3YCL069W PAU7P39545 55 aa6.1□□□□□ -1.43
VBA3YCL069W RRT13P40042 185 aa6.1□□□□□ -1.43
VBA3YCL069W YDR366CP87287 132 aa6.1□□□□□ -1.43
VBA3YCL069W GPI19Q04082 140 aa6.1□□□□□ -1.43
VBA3YCL069W POR1P04840 283 aaKnown RBP6.09□□□□□ -1.43
VBA3YCL069W RPL11AP0C0W9 174 aaKnown RBP6.09□□□□□ -1.43
VBA3YCL069W BRP1P53194 125 aa6.09□□□□□ -1.43
VBA3YCL069W RPL11BQ3E757 174 aaPredicted RBP6.09□□□□□ -1.43
VBA3YCL069W RPL23AP0CX41 137 aaKnown RBP6.08□□□□□ -1.44
VBA3YCL069W RPL23BP0CX42 137 aaKnown RBP6.08□□□□□ -1.44
VBA3YCL069W SAE3P89114 91 aa6.08□□□□□ -1.44
VBA3YCL069W POM33Q12164 279 aa6.08□□□□□ -1.44
VBA3YCL069W YCR024C-BQ3E7Z8 88 aa6.08□□□□□ -1.44
VBA3YCL069W DIF1O13577 133 aa6.07□□□□□ -1.44
VBA3YCL069W YOR304C-AO14468 76 aa6.07□□□□□ -1.44
VBA3YCL069W YAR1P46683 200 aa6.07□□□□□ -1.44
VBA3YCL069W VAM10Q08474 114 aa6.07□□□□□ -1.44
VBA3YCL069W FSF1Q12029 327 aaKnown RBP6.07□□□□□ -1.44
VBA3YCL069W SEC4P07560 215 aaKnown RBP6.06□□□□□ -1.44
VBA3YCL069W SGF11Q03067 99 aa6.06□□□□□ -1.44
VBA3YCL069W AIM34Q03673 198 aa6.06□□□□□ -1.44
VBA3YCL069W YBR182C-AQ8TGU6 64 aa6.06□□□□□ -1.44
VBA3YCL069W YGR149WP48236 432 aa6.06□□□□□ -1.44
VBA3YCL069W HAL1Q01766 294 aa6.06□□□□□ -1.44
VBA3YCL069W YLR042CQ07990 161 aa6.06□□□□□ -1.44
VBA3YCL069W RPS22BQ3E7Y3 130 aaKnown RBP6.06□□□□□ -1.44
VBA3YCL069W YCR075W-AQ3E830 75 aa6.06□□□□□ -1.44
VBA3YCL069W RPS8AP0CX39 200 aaKnown RBP6.05□□□□□ -1.44
VBA3YCL069W RPS8BP0CX40 200 aaKnown RBP6.05□□□□□ -1.44
VBA3YCL069W YKR032WP36127 104 aa6.05□□□□□ -1.44
VBA3YCL069W CDC40P40968 455 aaPredicted RBP6.05□□□□□ -1.44
VBA3YCL069W YCH1P42937 148 aa6.05□□□□□ -1.44
VBA3YCL069W GLO1P50107 326 aa6.05□□□□□ -1.44
VBA3YCL069W YPS5P53057 165 aa6.05□□□□□ -1.44
VBA3YCL069W CYT2Q00873 224 aa6.05□□□□□ -1.44
VBA3YCL069W TVP18Q04767 167 aa6.05□□□□□ -1.44
VBA3YCL069W MRPL28P36527 147 aa6.04□□□□□ -1.44
VBA3YCL069W YCR023CP25351 611 aa6.03□□□□□ -1.44
VBA3YCL069W PET8P38921 284 aa6.03□□□□□ -1.44
VBA3YCL069W YNL217WP40152 326 aa6.03□□□□□ -1.44
VBA3YCL069W TPT1Q12272 230 aaKnown RBP6.03□□□□□ -1.44
VBA3YCL069W YLR361C-AQ3E795 98 aa6.03□□□□□ -1.44
VBA3YCL069W KTI12P34253 313 aaKnown RBP6.02□□□□□ -1.45
VBA3YCL069W KRE9P39005 276 aa6.02□□□□□ -1.45
VBA3YCL069W YPT53P36019 220 aa6.01□□□□□ -1.45
VBA3YCL069W DGA1Q08650 418 aa6□□□□□ -1.45
VBA3YCL069W VTS1Q08831 523 aaKnown RBP RIP-Chip data6□□□□□ -1.45not detected
VBA3YCL069W RPL42AP0CX27 106 aaKnown RBP5.99□□□□□ -1.45
VBA3YCL069W RPL42BP0CX28 106 aaKnown RBP5.99□□□□□ -1.45
VBA3YCL069W ERG28P40030 148 aa5.99□□□□□ -1.45
VBA3YCL069W YNL200CP40165 246 aaKnown RBP5.99□□□□□ -1.45
VBA3YCL069W ATP23P53722 227 aa5.99□□□□□ -1.45
VBA3YCL069W YGR240C-AQ3E786 66 aa5.99□□□□□ -1.45
VBA3YCL069W YPR014CQ6B0W2 109 aa5.99□□□□□ -1.45
VBA3YCL069W RPS28BP0C0X0 67 aaKnown RBP5.98□□□□□ -1.45
VBA3YCL069W YBR121C-AP0C5L4 52 aa5.98□□□□□ -1.45
VBA3YCL069W TEM1P38987 245 aa5.98□□□□□ -1.45
VBA3YCL069W UIP3P39547 235 aa5.98□□□□□ -1.45
VBA3YCL069W RPS28AQ3E7X9 67 aaPredicted RBP5.98□□□□□ -1.45
VBA3YCL069W SAL1D6W196 494 aa5.97□□□□□ -1.45
VBA3YCL069W DCV1P43595 202 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 79.2 ms