RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ATP5DP30049 168 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 MIPP30301 263 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 OTUD4Q01804 1114 aaKnown RBP17.93■□□□□ 0.46
PHGDH-211ENST00000641213 MYO1EQ12965 1108 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 MORF4L2Q15014 288 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 ACAP1Q15027 740 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 DCAF4L1Q3SXM0 396 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 FAM102AQ5T9C2 384 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-211ENST00000641213 IQSEC1Q6DN90 963 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 LCLAT1Q6UWP7 414 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 TADA2BQ86TJ2 420 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 TTC39CQ8N584 583 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 ACTL9Q8TC94 416 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 PRMT1Q99873 361 aaKnown RBP17.93■□□□□ 0.46
PHGDH-211ENST00000641213 ADAMTS10Q9H324 1103 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 CCDC134Q9H6E4 229 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 PCDH9Q9HC56 1237 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 SAYSD1Q9NPB0 183 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 KIAA1257Q9ULG3 409 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
PHGDH-211ENST00000641213 RNF8O76064 485 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 TRUB2O95900 331 aaKnown RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 CREB1P16220 341 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 PECAM1P16284 738 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 HOXA11P31270 313 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 TMEM62Q0P6H9 643 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 IFT88Q13099 833 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 TAF5Q15542 800 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 RNASEH2BQ5TBB1 312 aaKnown RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 PLEKHH3Q7Z736 793 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 OTUD6BQ8N6M0 293 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 CMASQ8NFW8 434 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 NPLOC4Q8TAT6 608 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 PPM1EQ8WY54 764 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 NT5C1AQ9BXI3 368 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 LGALS13Q9UHV8 139 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 TSPAN16Q9UKR8 245 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 FOXO6A8MYZ6 492 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 PFKMP08237 780 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 ABHD2P08910 425 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 STAT4Q14765 748 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 CCDC142Q17RM4 750 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 GKAP1Q5VSY0 366 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 CYP4F22Q6NT55 531 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 CYP4X1Q8N118 509 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 TTC13Q8NBP0 860 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 KCTD6Q8NC69 237 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 CCDC77Q9BR77 488 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 FRMD8P1Q9BZ68 369 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-211ENST00000641213 ASNSD1Q9NWL6 643 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 USP18Q9UMW8 372 aa17.92■□□□□ 0.46
PHGDH-211ENST00000641213 RRN3P2A6NIE6 340 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 PIK3R2O00459 728 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 IFNB1P01574 187 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 LIG3P49916 1009 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 ZNF143P52747 638 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-211ENST00000641213 TRNP1Q6NT89 227 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 VSTM1Q6UX27 236 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 CACNA2D3Q8IZS8 1091 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 C12orf29Q8N999 325 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 ZMAT2Q96NC0 199 aaKnown RBP17.91■□□□□ 0.46
PHGDH-211ENST00000641213 FAM49AQ9H0Q0 323 aaPredicted RBP17.91■□□□□ 0.46
PHGDH-211ENST00000641213 PLEKHA5Q9HAU0 1116 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 SNTG2Q9NY99 539 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 NAALADL1Q9UQQ1 740 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 GINS2Q9Y248 185 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 E5RJQ4 531 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 CDH16O75309 829 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 GPR32O75388 356 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 GDF10P55107 478 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 FAM110CQ1W6H9 321 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 FAM183BPQ6ZVS7 135 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 HSPH1Q92598 858 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 CFAP57Q96MR6 1250 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 PEBP4Q96S96 227 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 PTPN18Q99952 460 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 C10orf88Q9H8K7 445 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 CDHR5Q9HBB8 845 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 EURLQ9NYK6 297 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 SHOC2Q9UQ13 582 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 DERAQ9Y315 318 aa17.91■□□□□ 0.46
PHGDH-211ENST00000641213 TMEM120BA0PK00 339 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 C2CD4BA6NLJ0 364 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 PPEF2O14830 753 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 GPD1P21695 349 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 PCK1P35558 622 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 IFNAR2P48551 515 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 SH3PXD2AQ5TCZ1 1133 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 OR6B2Q6IFH4 312 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 SLC27A1Q6PCB7 646 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 CATSPER4Q7RTX7 472 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 RFX6Q8HWS3 928 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 PRCCQ92733 491 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-211ENST00000641213 PIWIL1Q96J94 861 aaKnown RBP17.9■□□□□ 0.46
PHGDH-211ENST00000641213 CABS1Q96KC9 395 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 SNX27Q96L92 541 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 TTC25Q96NG3 672 aa17.9■□□□□ 0.46
PHGDH-211ENST00000641213 PARK7Q99497 189 aaKnown RBP17.9■□□□□ 0.46
PHGDH-211ENST00000641213 MRPL45Q9BRJ2 306 aaKnown RBP17.9■□□□□ 0.46
PHGDH-211ENST00000641213 CNPY3Q9BT09 278 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms