RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CCSAPQ6IQ19 270 aaPredicted RBP15.9■□□□□ 0.14
TRIM3-215ENST00000639856 NT5DC4Q86YG4 428 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 CCDC89Q8N998 374 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 KLHDC9Q8NEP7 349 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 TRAIPQ9BWF2 469 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 CDC42EP4Q9H3Q1 356 aaKnown RBP15.9■□□□□ 0.14
TRIM3-215ENST00000639856 CNOT10Q9H9A5 744 aaKnown RBP15.9■□□□□ 0.14
TRIM3-215ENST00000639856 CNTN3Q9P232 1028 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 RGS16O15492 202 aaPredicted RBP15.89■□□□□ 0.13
TRIM3-215ENST00000639856 CILPO75339 1184 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ADCY8P40145 1251 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ITGA8P53708 1063 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ZFYVE27Q5T4F4 411 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 CYP4A22Q5TCH4 519 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 DENND1BQ6P3S1 775 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ZNF365Q70YC5 407 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 SERINC5Q86VE9 423 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 SLC4A11Q8NBS3 891 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 MYCBPAPQ8TBZ2 947 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 FAM118BQ9BPY3 351 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 OSBPL7Q9BZF2 842 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 KLHL11Q9NVR0 708 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 IPPQ9Y573 584 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 E7EVH7 732 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 PI4K2BG5E9Z4 385 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 TJP3O95049 919 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 FAM107AO95990 144 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 CHRNA1P02708 482 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 KRT1P04264 644 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 CDR1P51861 262 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 COPS2P61201 443 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 HTRA3P83110 453 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 PTPN20Q4JDL3 420 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 TWF2Q6IBS0 349 aaKnown RBP15.89■□□□□ 0.13
TRIM3-215ENST00000639856 B4GALNT4Q76KP1 1039 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 SMG8Q8ND04 991 aaKnown RBP15.89■□□□□ 0.13
TRIM3-215ENST00000639856 UHMK1Q8TAS1 419 aaKnown RBP15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ZNF473Q8WTR7 871 aaKnown RBP15.89■□□□□ 0.13
TRIM3-215ENST00000639856 CCT8L2Q96SF2 557 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 PPANQ9NQ55 473 aaKnown RBP15.89■□□□□ 0.13
TRIM3-215ENST00000639856 ANAPC5Q9UJX4 755 aa15.89■□□□□ 0.13
TRIM3-215ENST00000639856 TRAPPC3O43617 180 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 AGTP01019 485 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 HMGCRP04035 888 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 KRT10P13645 584 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 CHKAP35790 457 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 APLP1P51693 650 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 LMNB2Q03252 620 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 MFSD7Q6UXD7 560 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 BBOF1Q8ND07 529 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 ROPN1BQ9BZX4 212 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 ROPN1Q9HAT0 212 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 DDX56Q9NY93 547 aaKnown RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 DERAQ9Y315 318 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 TRPV2Q9Y5S1 764 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 SMIM28A0A1B0GU29 152 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 GMNCA6NCL1 334 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 SMIM23A6NLE4 172 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 SIGLEC16A6NMB1 481 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 M0QZ92 97 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 RASGRF2O14827 1237 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 LIASO43766 372 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 P4HA1P13674 534 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 ATF7P17544 494 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 PTPN7P35236 360 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 VPS41P49754 854 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 CORO7P57737 925 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 KAZNQ674X7 775 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 DRICH1Q6PGQ1 229 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 SPOCD1Q6ZMY3 1216 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 EPS8L3Q8TE67 593 aaKnown RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 SENP6Q9GZR1 1112 aaPredicted RBP15.88■□□□□ 0.13
TRIM3-215ENST00000639856 FAM107BQ9H098 131 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 CYP3A43Q9HB55 503 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 GOLGA2P5Q9HBQ8 144 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 CYTH4Q9UIA0 394 aa15.88■□□□□ 0.13
TRIM3-215ENST00000639856 MEIS3P2A8K0S8 358 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 STAU1O95793 577 aaKnown RBP15.87■□□□□ 0.13
TRIM3-215ENST00000639856 KRT3P12035 628 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 KLRC2P26717 231 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 RFC1P35251 1148 aaPredicted RBP15.87■□□□□ 0.13
TRIM3-215ENST00000639856 NDST1P52848 882 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 PTPN11Q06124 597 aaPredicted RBP15.87■□□□□ 0.13
TRIM3-215ENST00000639856 SOX4Q06945 474 aaPredicted RBP15.87■□□□□ 0.13
TRIM3-215ENST00000639856 TNFAIP8L3Q5GJ75 292 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 TFDP3Q5H9I0 405 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 TXNRD3NBQ6F5E7 133 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 SESTD1Q86VW0 696 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 BEST2Q8NFU1 509 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 TMEM176AQ96HP8 235 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 DDX23Q9BUQ8 820 aaKnown RBP15.87■□□□□ 0.13
TRIM3-215ENST00000639856 CFHR5Q9BXR6 569 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 STMN4Q9H169 189 aaPredicted RBP15.87■□□□□ 0.13
TRIM3-215ENST00000639856 TJP2Q9UDY2 1190 aa15.87■□□□□ 0.13
TRIM3-215ENST00000639856 ST3GAL5Q9UNP4 418 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms