RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 SNX11Q9Y5W9 270 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CENPEQ02224 2701 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 A0A0B4J269 797 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 A0A1B0GVT2 93 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 H0Y8X5 98 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PIK3CDO00329 1044 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 VILLO15195 856 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 KCNN4O15554 427 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 RTN2O75298 545 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CNTN5O94779 1100 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PARP1P09874 1014 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 THEGLP0DJG4 465 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 NCAM1P13591 858 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ATF2P15336 505 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 GABRG2P18507 467 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 KLRC1P26715 233 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ATP1A2P50993 1020 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 MC1RQ01726 317 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 DNAJC3Q13217 504 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF211Q13398 564 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 MRPL58Q14197 206 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PCBP1Q15365 356 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PDCD2Q16342 344 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 TMEM198Q66K66 360 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 HGSNATQ68CP4 663 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CTR9Q6PD62 1173 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CLEC9AQ6UXN8 241 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 KSR1Q8IVT5 923 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PGBD3Q8N328 593 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 DNAJB8Q8NHS0 232 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 HMGB4Q8WW32 186 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 NDRG1Q92597 394 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ELF4Q99607 663 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 EFHD1Q9BUP0 239 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 GPR62Q9BZJ7 368 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 GKN1Q9NS71 199 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 POLR3BQ9NW08 1133 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 USP36Q9P275 1121 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 INPP5FQ9Y2H2 1132 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PCDHGB7Q9Y5F8 929 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 COL27A1Q8IZC6 1860 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 BAZ2AQ9UIF9 1905 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 EFCAB7A8K855 629 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ICMTO60725 284 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 LRCH4O75427 683 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ATP2B1P20020 1258 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 FGFR3P22607 806 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 TMOD1P28289 359 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 EPHA8P29322 1005 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 MLLT10P55197 1068 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 IGBP1P78318 339 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 RAD51AP2Q09MP3 1159 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 PSMD2Q13200 908 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 MTX1Q13505 466 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 SHBQ15464 509 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF630Q2M218 657 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 SLC10A6Q3KNW5 377 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 RTP2Q5QGT7 225 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 SDE2Q6IQ49 451 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 TREML4Q6UXN2 200 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 BNC2Q6ZN30 1099 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 KCTD1Q719H9 257 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 PARS2Q7L3T8 475 aaKnown RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 TICAM2Q86XR7 235 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ANKMY2Q8IV38 441 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 Q8NA96 180 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 IL17RCQ8NAC3 791 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 APOBEC4Q8WW27 367 aaKnown RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 C18orf12Q96KH6 178 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 SPOCK3Q9BQ16 436 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 LRRC3Q9BY71 257 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 SNTG2Q9NY99 539 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 WSB2Q9NYS7 404 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 HSFX1Q9UBD0 423 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ISY1Q9ULR0 285 aaKnown RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 KCTD3Q9Y597 815 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 PCDHA8Q9Y5H6 950 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 TTLL8A6PVC2 850 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 MKRN2OSH3BPM6 223 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 PRRG1O14668 218 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 KLF8O95600 359 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ABL1P00519 1130 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 HNRNPLP14866 589 aaKnown RBP eCLIP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ABCB4P21439 1286 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ARRB1P49407 418 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 NT5C2P49902 561 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 FOLH1Q04609 750 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 HSP90AA2PQ14568 343 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 GPATCH4Q5T3I0 446 aaKnown RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 CCDC181Q5TID7 509 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 DCAF12L1Q5VU92 463 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 CEP135Q66GS9 1140 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 CC2D1AQ6P1N0 951 aaPredicted RBP3.87□□□□□ -1.79
CCDC7-213ENST00000639290 DTX1Q86Y01 620 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 GLYCTKQ8IVS8 523 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 CCDC13Q8IYE1 715 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 HACE1Q8IYU2 909 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF295-AS1Q8N0V1 137 aa3.87□□□□□ -1.79
CCDC7-213ENST00000639290 REXO1Q8N1G1 1221 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms