RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SMTNL2Q2TAL5 461 aa20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 C12orf29Q8N999 325 aa20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 UHMK1Q8TAS1 419 aaKnown RBP20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 C18orf25Q96B23 403 aaPredicted RBP20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 MRPL45Q9BRJ2 306 aaKnown RBP20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 ROPN1BQ9BZX4 212 aaPredicted RBP20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 ROPN1Q9HAT0 212 aaPredicted RBP20.73■□□□□ 0.91
PCDHB11-202ENST00000624887 TLDC2A0PJX2 215 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 RGS16O15492 202 aaPredicted RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 TREHO43280 583 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 RNF8O76064 485 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 RECQL4O94761 1208 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 TTC4O95801 387 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 KDELR1P24390 212 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 SREBF2Q12772 1141 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 SNX17Q15036 470 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 KCNT1Q5JUK3 1230 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 HIBCHQ6NVY1 386 aaPredicted RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 TMEM40Q8WWA1 233 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 DDX23Q9BUQ8 820 aaKnown RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 AP5M1Q9H0R1 490 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 PDCD11Q14690 1871 aaKnown RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 RASGRF2O14827 1237 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 ITGAVP06756 1048 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 PCK1P35558 622 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 ZNF143P52747 638 aaPredicted RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 GOLGA7BQ2TAP0 167 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 PRUNE1Q86TP1 453 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 RELL1Q8IUW5 271 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 CMASQ8NFW8 434 aaPredicted RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 FRMD8P1Q9BZ68 369 aaPredicted RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 FOXP3Q9BZS1 431 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 CNOT10Q9H9A5 744 aaKnown RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 ASNSD1Q9NWL6 643 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 RSPH14Q9UHP6 348 aa20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 UBQLN1Q9UMX0 589 aaKnown RBP20.72■□□□□ 0.91
PCDHB11-202ENST00000624887 TRIP12Q14669 1992 aaPredicted RBP20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 E5RJQ4 531 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 AGTP01019 485 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 IGHA2P01877 340 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 MYL3P08590 195 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 CYP2B6P20813 491 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 MIPP30301 263 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 RGS2P41220 211 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 P3H1Q32P28 736 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 PKDCCQ504Y2 493 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 GLRA4Q5JXX5 417 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 PPP1R26Q5T8A7 1209 aaPredicted RBP20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 C9orf57Q5W0N0 161 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 MFSD5Q6N075 450 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 GLIS1Q8NBF1 620 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 SLC35B2Q8TB61 432 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 EPS8L3Q8TE67 593 aaKnown RBP20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 HHIPL1Q96JK4 782 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 KATNAL1Q9BW62 490 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 ADAM7Q9H2U9 754 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 RABEP2Q9H5N1 569 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 ZFYVE28Q9HCC9 887 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 USP18Q9UMW8 372 aa20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 PIN4Q9Y237 131 aaKnown RBP20.71■□□□□ 0.91
PCDHB11-202ENST00000624887 TMEM88BA6NKF7 163 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 ACSL3O95573 720 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 TRUB2O95900 331 aaKnown RBP20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 ZNF200P98182 395 aaPredicted RBP20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 TNFAIP8L3Q5GJ75 292 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 OR6B2Q6IFH4 312 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 FAM183BPQ6ZVS7 135 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 BBS12Q6ZW61 710 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 ACOT1Q86TX2 421 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 UNC93AQ86WB7 457 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 TTC13Q8NBP0 860 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 HAUS1Q96CS2 278 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 CNPY3Q9BT09 278 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 STMN4Q9H169 189 aaPredicted RBP20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 PCSK1NQ9UHG2 260 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 NME7Q9Y5B8 376 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 SMIM23A6NLE4 172 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 C2CD4BA6NLJ0 364 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 DNALI1O14645 258 aaPredicted RBP20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 SETSIPP0DME0 302 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 GPD1P21695 349 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 AKAP5P24588 427 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 CCT5P48643 541 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 ARSEP51690 589 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 BEX3Q00994 111 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 CEP128Q6ZU80 1094 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 ZCCHC9Q8N567 271 aaKnown RBP20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 TSPAN18Q96SJ8 248 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 APBA2Q99767 749 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 GJD2Q9UKL4 321 aa20.7■□□□□ 0.9
PCDHB11-202ENST00000624887 C17orf102A2RUQ5 167 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 NDUFAB1O14561 156 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 CST8O60676 142 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 CD4P01730 458 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 HOXC8P31273 242 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 CDR1P51861 262 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 CRYBB1P53674 252 aaPredicted RBP20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 AUHQ13825 339 aaKnown RBP20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 SOWAHAQ2M3V2 549 aa20.69■□□□□ 0.9
PCDHB11-202ENST00000624887 XKR4Q5GH76 650 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms