RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TTC4O95801 387 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 TFPTP0C1Z6 253 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 PLA2G4BP0C869 781 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 PRKCIP41743 596 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 GALCP54803 685 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 IRX4P78413 519 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 NR1H3Q13133 447 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 SNAPC2Q13487 334 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 CACTIN-AS1Q8N1I8 211 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 KLC2Q9H0B6 622 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 DBNDD1Q9H9R9 158 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 PALMDQ9NP74 551 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 OSGEPQ9NPF4 335 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 HOXC10Q9NYD6 342 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 ANKFY1Q9P2R3 1169 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 PLA2G4CQ9UP65 541 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
VPS11-207ENST00000620429 AQP9O43315 295 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 CSDE1O75534 798 aaKnown RBP10.83□□□□□ -0.68
VPS11-207ENST00000620429 ACADSBP45954 432 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 GPC3P51654 580 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 CACNB3P54284 484 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 UBE2SQ16763 222 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
VPS11-207ENST00000620429 EDRF1Q3B7T1 1238 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 DPY19L2P1Q6NXN4 242 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 DPP8Q6V1X1 898 aaPredicted RBP10.83□□□□□ -0.68
VPS11-207ENST00000620429 CAPN12Q6ZSI9 719 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 RFX8Q6ZV50 586 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 ZFPM1Q8IX07 1006 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 ICA1LQ8NDH6 482 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 SLC7A5P2Q9GIP4 190 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 NPHS2Q9NP85 383 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 ARHGEF4Q9NR80 690 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 HEY2Q9UBP5 337 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 AJAP1Q9UKB5 411 aaPredicted RBP10.83□□□□□ -0.68
VPS11-207ENST00000620429 PCDHA12Q9UN75 941 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 BCS1LQ9Y276 419 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS11-207ENST00000620429 CDK5RAP2Q96SN8 1893 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 A0A1W2PQ67 120 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
VPS11-207ENST00000620429 DPEP1P16444 411 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 NFIAQ12857 509 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 TLR1Q15399 786 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 DCAF6Q58WW2 860 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 WDR45BQ5MNZ6 344 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 GJB7Q6PEY0 223 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 FASTKD5Q7L8L6 764 aaKnown RBP10.83□□□□□ -0.68
VPS11-207ENST00000620429 ITIH5Q86UX2 942 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 MCF2L2Q86YR7 1114 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 ULK2Q8IYT8 1036 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 OR7G1Q8NGA0 311 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 GDPD5Q8WTR4 605 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 HAS1Q92839 578 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 C18orf8Q96DM3 657 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 OTUD5Q96G74 571 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 CEP295NLQ96MC4 621 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 COA1Q9GZY4 146 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 EHD1Q9H4M9 534 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 Q9H521 79 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 ARMC7Q9H6L4 198 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 IGSF9Q9P2J2 1179 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 SEL1LQ9UBV2 794 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 SLC7A8Q9UHI5 535 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 GRID1Q9ULK0 1009 aa10.83□□□□□ -0.68
VPS11-207ENST00000620429 ANKRD31Q8N7Z5 1873 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 POTECB2RU33 542 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 TXNDC9O14530 226 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 TEX28O15482 410 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CHRNB1P11230 501 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CETPP11597 493 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 KRT13P13646 458 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 ABCB4P21439 1286 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CTNNA2P26232 953 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 HMOX2P30519 316 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 FDFT1P37268 417 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 PCYT1AP49585 367 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 NCKAP1LP55160 1127 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CTAG1AP78358 180 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CDK16Q00536 496 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 ZNF211Q13398 564 aaPredicted RBP10.82□□□□□ -0.68
VPS11-207ENST00000620429 NCOA4Q13772 614 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 TNIP1Q15025 636 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 KCNJ8Q15842 424 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 SIGIRRQ6IA17 410 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 TTC23LQ6PF05 361 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 POTEBQ6S5H4 581 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 RNF111Q6ZNA4 994 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 FRMD5Q7Z6J6 570 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 CCDC25Q86WR0 208 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 GRAMD2AQ8IUY3 354 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 PCYOX1LQ8NBM8 494 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 MAML1Q92585 1016 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 MTBPQ96DY7 904 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 PLEKHA8Q96JA3 519 aa10.82□□□□□ -0.68
VPS11-207ENST00000620429 IRF2BPLQ9H1B7 796 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms