RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 TEKT1Q969V4 418 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 LRGUKQ96M69 825 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 PLEKHG4BQ96PX9 1271 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 SRPK1Q96SB4 655 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 MMP19Q99542 508 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 LIN28AQ9H9Z2 209 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 SEL1LQ9UBV2 794 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 RABGEF1Q9UJ41 708 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 NUP188Q5SRE5 1749 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 C15orf38-AP3S2A0A0A6YYH1 394 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 H7C0C1 242 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ZSCAN9O15535 394 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 DGKIO75912 1065 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 CYP3A4P08684 503 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DLDP09622 509 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 UQCRBP14927 111 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TCN1P20061 433 aaPredicted RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 ATP5OP48047 213 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 CHN2P52757 468 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ACTR3P61158 418 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 GPSM2P81274 684 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 PDE1BQ01064 536 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 FOLH1Q04609 750 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 PPIDQ08752 370 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 NFIAQ12857 509 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 MORF4L2Q15014 288 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ZNF568Q3ZCX4 644 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 SLC44A4Q53GD3 710 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 HSP90AA5PQ58FG0 334 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ATG16L1Q676U5 607 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 PLA2G4FQ68DD2 849 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 C16orf46Q6P387 395 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DNAJC24Q6P3W2 148 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 LRRC8BQ6P9F7 803 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ANO5Q75V66 913 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 OTOP1Q7RTM1 612 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ARPINQ7Z6K5 226 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 HPS6Q86YV9 775 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 NDUFAF2Q8N183 169 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 ZNF398Q8TD17 642 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 VTI1AQ96AJ9 217 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 HSPBAP1Q96EW2 488 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 IWS1Q96ST2 819 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 HSD17B14Q9BPX1 270 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 TEKT3Q9BXF9 490 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 UNC45AQ9H3U1 944 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DMAC2Q9NW81 257 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 VAV3Q9UKW4 847 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 DOLKQ9UPQ8 538 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 APOBEC2Q9Y235 224 aaKnown RBP6.97□□□□□ -1.29
LMO3-235ENST00000616247 DCCP43146 1447 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 SNED1Q8TER0 1413 aa6.97□□□□□ -1.29
LMO3-235ENST00000616247 PARP4Q9UKK3 1724 aaKnown RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 TCRBV7S3A2A0A539 114 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 DENND3A2RUS2 1198 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 KBTBD13C9JR72 458 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 IPO5O00410 1097 aaKnown RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 AIM2O14862 343 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 TBX3O15119 743 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 TM9SF1O15321 606 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 LYPLA1O75608 230 aaPredicted RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 TOP3BO95985 862 aaKnown RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 CD19P15391 556 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 GNA15P30679 374 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 GRIA2P42262 883 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 SH3BGRP55822 239 aaPredicted RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 PSMC5P62195 406 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 OTUD4Q01804 1114 aaKnown RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 STX3Q13277 289 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 CYP4A22Q5TCH4 519 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 TXNRD3NBQ6F5E7 133 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 B3GNT6Q6ZMB0 384 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 ACAD11Q709F0 780 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 PTF1AQ7RTS3 328 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 NCAPG2Q86XI2 1143 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 WDR75Q8IWA0 830 aaKnown RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 HSPH1Q92598 858 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 SLCO2A1Q92959 643 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 LENG9Q96B70 501 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 SKA1Q96BD8 255 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 DGCR14Q96DF8 476 aaKnown RBP6.96□□□□□ -1.29
LMO3-235ENST00000616247 WDR18Q9BV38 432 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 S100A14Q9HCY8 104 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 IL1RAPL1Q9NZN1 696 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 SOX13Q9UN79 622 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 LZTS1Q9Y250 596 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 INPP5FQ9Y2H2 1132 aa6.96□□□□□ -1.29
LMO3-235ENST00000616247 BCL9O00512 1426 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 TBC1D12O60347 775 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 FKBP6O75344 327 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 KRT37O76014 449 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 FUT4P22083 530 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 KLRC2P26717 231 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 SREBF1P36956 1147 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 CCR3P51677 355 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 NCKAP1LP55160 1127 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 KLC3Q6P597 504 aa6.96□□□□□ -1.3
LMO3-235ENST00000616247 DARS2Q6PI48 645 aaKnown RBP6.96□□□□□ -1.3
LMO3-235ENST00000616247 TSHZ1Q6ZSZ6 1077 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms