RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 ATP7BP35670 1465 aa16.04■□□□□ 0.16
TNXB-209ENST00000613214 CSF1RP07333 972 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 GTF2E2P29084 291 aaKnown RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 ITGA8P53708 1063 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 TRIM25Q14258 630 aaKnown RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 C9orf131Q5VYM1 1079 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 EDEM1Q92611 657 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 GPRASP2Q96D09 838 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 MYMKA6NI61 221 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 DGAT1O75907 488 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 STIP1P31948 543 aaKnown RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 TMEM154Q6P9G4 183 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 ENOSF1Q7L5Y1 443 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 P3H2Q8IVL5 708 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 NT5MQ9NPB1 228 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 KIF1BO60333 1816 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 FMR1NBQ8N0W7 255 aaPredicted RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 TRPC4APQ8TEL6 797 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 TUBGCP3Q96CW5 907 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 ATP5HO75947 161 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 TOMM70O94826 608 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 GRK2P25098 689 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 PCSK1P29120 753 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 KRT20P35900 424 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.03■□□□□ 0.16
TNXB-209ENST00000613214 FLCNQ8NFG4 579 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 C2orf81A6NN90 581 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 TGM2P21980 687 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 C12orf60Q5U649 245 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 MRPS31Q92665 395 aaKnown RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
TNXB-209ENST00000613214 POLG2Q9UHN1 485 aa16.03■□□□□ 0.16
TNXB-209ENST00000613214 URODP06132 367 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 CCR4P51679 360 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 DET1Q7L5Y6 550 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 NT5DC4Q86YG4 428 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 CENPLQ8N0S6 344 aaPredicted RBP16.02■□□□□ 0.16
TNXB-209ENST00000613214 CELF6Q96J87 481 aaKnown RBP16.02■□□□□ 0.16
TNXB-209ENST00000613214 NBPF26B4DH59 902 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 GRIN3BO60391 1043 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 PHF2O75151 1096 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 LTFP02788 710 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 RUNX1T1Q06455 604 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
TNXB-209ENST00000613214 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 USP20Q9Y2K6 914 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 CHURC1-FNTBB4DL54 471 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 PSMD3O43242 534 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 ZNF543Q08ER8 600 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 PIGHQ14442 188 aaPredicted RBP16.02■□□□□ 0.16
TNXB-209ENST00000613214 WDR24Q96S15 920 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 REXO4Q9GZR2 422 aaKnown RBP16.02■□□□□ 0.16
TNXB-209ENST00000613214 STARD7Q9NQZ5 370 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 DNMT1P26358 1616 aaKnown RBP16.02■□□□□ 0.16
TNXB-209ENST00000613214 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.16
TNXB-209ENST00000613214 ERI2A8K979 691 aaKnown RBP16.02■□□□□ 0.15
TNXB-209ENST00000613214 TAF6P49848 677 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 AP3M2P53677 418 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 IL1RAPL1Q9NZN1 696 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 PSMD12O00232 456 aaPredicted RBP16.02■□□□□ 0.15
TNXB-209ENST00000613214 DLGAP3O95886 979 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 SERPINB10P48595 397 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 PRR5LQ6MZQ0 368 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 ATG4AQ8WYN0 398 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 ACOX2Q99424 681 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 NDEL1Q9GZM8 345 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 SOX13Q9UN79 622 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 NCKAP1LP55160 1127 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 RNASE11Q8TAA1 199 aaKnown RBP16.02■□□□□ 0.15
TNXB-209ENST00000613214 MDM1Q8TC05 714 aa16.02■□□□□ 0.15
TNXB-209ENST00000613214 PTCH1Q13635 1447 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 NR5A2O00482 541 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 ACOX1Q15067 660 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 TPD52L3Q96J77 140 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 TMEM39AQ9NV64 488 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 INTS13Q9NVM9 706 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 TPGS1Q6ZTW0 290 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 HDDC2Q7Z4H3 204 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 CCDC103Q8IW40 242 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 POMGNT2Q8NAT1 580 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 PLA2G4CQ9UP65 541 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 CYP2C19P33261 490 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 PDK1Q15118 436 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 LY6KQ17RY6 165 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 IRAK1BP1Q5VVH5 260 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 LRRC8BQ6P9F7 803 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 FICDQ9BVA6 458 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 KCNH7Q9NS40 1196 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 SCNN1BP51168 640 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 LAMC2Q13753 1193 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 MARK2Q7KZI7 788 aaKnown RBP16.01■□□□□ 0.15
TNXB-209ENST00000613214 RNF44Q7L0R7 432 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 CYP4X1Q8N118 509 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 SPATA4Q8NEY3 305 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.01■□□□□ 0.15
TNXB-209ENST00000613214 DYRK1BQ9Y463 629 aa16.01■□□□□ 0.15
TNXB-209ENST00000613214 COPG1Q9Y678 874 aaKnown RBP16.01■□□□□ 0.15
TNXB-209ENST00000613214 SPACA6W5XKT8 324 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms