RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SLC35B2Q8TB61 432 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 TMEM176AQ96HP8 235 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 DICER1Q9UPY3 1922 aaKnown RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 NME7Q9Y5B8 376 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CCT8L1PA6NM43 557 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 E5RJQ4 531 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 ADCY6O43306 1168 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 YBX3P16989 372 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 GPD2P43304 727 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CTCFP49711 727 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 WDR4P57081 412 aaKnown RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CGB2Q6NT52 195 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 KCTD6Q8NC69 237 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 PRCCQ92733 491 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 KLF6Q99612 283 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM49AQ9H0Q0 323 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 STMN4Q9H169 189 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CDHR5Q9HBB8 845 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 EURLQ9NYK6 297 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 SAMD15Q9P1V8 674 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 GRID1Q9ULK0 1009 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 TMEM63AO94886 807 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 RPL22P35268 128 aaKnown RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 PHKA2P46019 1235 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 GPX6P59796 221 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 PPIL2Q13356 520 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 SURF1Q15526 300 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CPT1BQ92523 772 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 MAML1Q92585 1016 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 LENG1Q96BZ8 264 aaPredicted RBP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 CFAP57Q96MR6 1250 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 ZNF518BQ9C0D4 1074 aa14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDHGA3-202ENST00000612467 SNX3O60493 162 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 CDH16O75309 829 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 TFE3P19532 575 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 OSBPP22059 807 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 STX2P32856 288 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 LRRC38Q5VT99 294 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 OR6B2Q6IFH4 312 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 C1orf228Q6PIY5 440 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 TGS1Q96RS0 853 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 ADPGKQ9BRR6 497 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 B3GNT5Q9BYG0 378 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 CD248Q9HCU0 757 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 PRMT7Q9NVM4 692 aaPredicted RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 GJD2Q9UKL4 321 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 TSPAN16Q9UKR8 245 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 CLUHO75153 1309 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 GOLGA8RI6L899 631 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 MYO1EQ12965 1108 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 TMEM132DQ14C87 1099 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAXCQ5TGI0 409 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 SCYL2Q6P3W7 929 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM183BPQ6ZVS7 135 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 NIPA2Q8N8Q9 360 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 ZMAT2Q96NC0 199 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 MRPL45Q9BRJ2 306 aaKnown RBP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 C16orf70Q9BSU1 422 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 APOL6Q9BWW8 343 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 SETD4Q9NVD3 440 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 GGA2Q9UJY4 613 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 USP18Q9UMW8 372 aa14.78□□□□□ -0.04
PCDHGA3-202ENST00000612467 TSPAN1O60635 241 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 AVILO75366 819 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 KRT15P19012 456 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 ATXN1P54253 815 aaKnown RBP14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 CCDC142Q17RM4 750 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 ZC3H12AQ5D1E8 599 aaKnown RBP14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 ACOT1Q86TX2 421 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 IGDCC3Q8IVU1 814 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 NETO2Q8NC67 525 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 RXFP2Q8WXD0 754 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 NKD2Q969F2 451 aaPredicted RBP14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 C18orf25Q96B23 403 aaPredicted RBP14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 KIF12Q96FN5 646 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 RMDN2Q96LZ7 410 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 SLCO1B3Q9NPD5 702 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 NR2E3Q9Y5X4 410 aa14.77□□□□□ -0.04
PCDHGA3-202ENST00000612467 UBOX5O94941 541 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 PFKMP08237 780 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 BASP1P80723 227 aaKnown RBP14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 PRAMEF19Q5SWL8 479 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 MARCH8Q5T0T0 291 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 CYP4V2Q6ZWL3 525 aaPredicted RBP14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 CROCCP2Q86T23 111 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 BBOF1Q8ND07 529 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 CKAP2Q8WWK9 683 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 EIF2AQ9BY44 585 aaKnown RBP14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 LHX5Q9H2C1 402 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 CCDC134Q9H6E4 229 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 DPP3Q9NY33 737 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 DDX56Q9NY93 547 aaKnown RBP14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 SNTG2Q9NY99 539 aa14.77□□□□□ -0.05
PCDHGA3-202ENST00000612467 TUBGCP4Q9UGJ1 667 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms