RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ITPRIPL1Q6GPH6 555 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 RASSF3Q86WH2 238 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 KIAA0319LQ8IZA0 1049 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 HIPK4Q8NE63 616 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ASB7Q9H672 318 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 PDGFCQ9NRA1 345 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 PCMTD2Q9NV79 361 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.72□□□□□ -0.211e-9■■■□□ 15.4
TCF3-220ENST00000611869 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
TCF3-220ENST00000611869 CPB1P15086 417 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 VCPP55072 806 aaKnown RBP13.72□□□□□ -0.21
TCF3-220ENST00000611869 CORO7P57737 925 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ZBTB41Q5SVQ8 909 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 DENND1BQ6P3S1 775 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 CD302Q8IX05 232 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 NFKBIEO00221 500 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 CHUKO15111 745 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 PMLP29590 882 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 RTP1P59025 263 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 COPS2P61201 443 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 LBX2Q6XYB7 198 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 PRUNE1Q86TP1 453 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ERP27Q96DN0 273 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 CDT1Q9H211 546 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ZFYVE28Q9HCC9 887 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 DMAC2Q9NW81 257 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 HES2Q9Y543 173 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 OPLAHO14841 1288 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 CFLARO15519 480 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 BNIP3LO60238 219 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 MICAL2O94851 1124 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ATICP31939 592 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 PNPLA4P41247 253 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 JAM2P57087 298 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 NFIL3Q16649 462 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 FBXO47Q5MNV8 452 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 SPATA2LQ8IUW3 424 aaPredicted RBP13.72□□□□□ -0.21
TCF3-220ENST00000611869 SCUBE3Q8IX30 993 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 CCNYL1Q8N7R7 359 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 VPS39Q96JC1 886 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 TUBB6Q9BUF5 446 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 ERVK-5Q9HDB9 667 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 SIX2Q9NPC8 291 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 KLC4Q9NSK0 619 aa13.72□□□□□ -0.21
TCF3-220ENST00000611869 MYPNQ86TC9 1320 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 PECAM1P16284 738 aaPredicted RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 MX2P20592 715 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 RFC1P35251 1148 aaPredicted RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 GEMIN4P57678 1058 aaKnown RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 POU5F1BQ06416 359 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 KIF2BQ8N4N8 673 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 URGCPQ8TCY9 931 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 ACO2Q99798 780 aaKnown RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 ABHD16BQ9H3Z7 469 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 SLC38A7Q9NVC3 462 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 COG5Q9UP83 839 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 CCT8L1PA6NM43 557 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 STRNO43815 780 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 DIAPH2O60879 1101 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 SHBGP04278 402 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 EIF4BP23588 611 aaKnown RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 YY1P25490 414 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 PCSK1P29120 753 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 ERFP50548 548 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 ASTE1Q2TB18 679 aaPredicted RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 MROH9Q5TGP6 573 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 NLGN2Q8NFZ4 835 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 OR6P1Q8NGX9 317 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 SPON2Q9BUD6 331 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 VTA1Q9NP79 307 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 MID2Q9UJV3 735 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 ZNF214Q9UL59 606 aaPredicted RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 TIMM13Q9Y5L4 95 aaPredicted RBP13.71□□□□□ -0.21
TCF3-220ENST00000611869 MYH3P11055 1940 aa13.71□□□□□ -0.21
TCF3-220ENST00000611869 TRIM49D1C9J1S8 452 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 CYB561D2O14569 222 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 AP1G2O75843 785 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 ACAT1P24752 427 aaKnown RBP13.71□□□□□ -0.22
TCF3-220ENST00000611869 NOMO3P69849 1222 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 MORF4L2Q15014 288 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 C3orf20Q8ND61 904 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 HELQQ8TDG4 1101 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 LBHD1Q9BQE6 289 aaPredicted RBP13.71□□□□□ -0.22
TCF3-220ENST00000611869 TSSK1BQ9BXA7 367 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 UBN1Q9NPG3 1134 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 XPNPEP1Q9NQW7 623 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 NAALADL1Q9UQQ1 740 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 PPME1Q9Y570 386 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 MYH6P13533 1939 aa13.71□□□□□ -0.22
TCF3-220ENST00000611869 TYW5A2RUC4 315 aaKnown RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 PFDN6O15212 129 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 FANCGO15287 622 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 MIPP30301 263 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 PPIL2Q13356 520 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 ADGRF2Q8IZF7 708 aa13.7□□□□□ -0.22
TCF3-220ENST00000611869 RIBC1Q8N443 379 aaPredicted RBP13.7□□□□□ -0.22
TCF3-220ENST00000611869 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms