RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 PCK1P35558 622 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.46e-8■■■■□ 20.1
SRRT-213ENST00000611405 FAM110CQ1W6H9 321 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 CNPY4Q8N129 248 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 GLIS1Q8NBF1 620 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 CMASQ8NFW8 434 aaPredicted RBP12.52□□□□□ -0.4
SRRT-213ENST00000611405 UBA3Q8TBC4 463 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 PPM1EQ8WY54 764 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 ARHGEF2Q92974 986 aaKnown RBP12.52□□□□□ -0.4
SRRT-213ENST00000611405 HAUS1Q96CS2 278 aa12.52□□□□□ -0.4
SRRT-213ENST00000611405 DDX20Q9UHI6 824 aaKnown RBP12.52□□□□□ -0.4
SRRT-213ENST00000611405 SGK1O00141 431 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 TRUB2O95900 331 aaKnown RBP12.52□□□□□ -0.41
SRRT-213ENST00000611405 MIPP30301 263 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 ZNF143P52747 638 aaPredicted RBP12.52□□□□□ -0.41
SRRT-213ENST00000611405 SMTNL2Q2TAL5 461 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 FAM102AQ5T9C2 384 aaPredicted RBP12.52□□□□□ -0.41
SRRT-213ENST00000611405 PCGF5Q86SE9 256 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 OTUD6BQ8N6M0 293 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 KCTD6Q8NC69 237 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 CFAP57Q96MR6 1250 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 CNPY3Q9BT09 278 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 SETD4Q9NVD3 440 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 SHOC2Q9UQ13 582 aa12.52□□□□□ -0.41
SRRT-213ENST00000611405 CST8O60676 142 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 GPD1P21695 349 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 RDXP35241 583 aaKnown RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 IRX5P78411 483 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 KIZQ2M2Z5 673 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 GKAP1Q5VSY0 366 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 C6orf89Q6UWU4 347 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 RIBC1Q8N443 379 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 SEC16BQ96JE7 1060 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 ZNF317Q96PQ6 595 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 USP18Q9UMW8 372 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 CDH16O75309 829 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 ETS1P14921 441 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 CYP3A5P20815 502 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 HOXA11P31270 313 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 YARSP54577 528 aaKnown RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 QPCTQ16769 361 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 RNASEH2BQ5TBB1 312 aaKnown RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 CATSPER4Q7RTX7 472 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 ACTL9Q8TC94 416 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 SNX27Q96L92 541 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 C9orf72Q96LT7 481 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 PCSK1NQ9UHG2 260 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 TSPAN16Q9UKR8 245 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 GPR32O75388 356 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 PECAM1P16284 738 aaPredicted RBP12.51□□□□□ -0.41
SRRT-213ENST00000611405 DYNLT1P63172 113 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 IRF5Q13568 498 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 CCDC142Q17RM4 750 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 GOLGA7BQ2TAP0 167 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 OR6B2Q6IFH4 312 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 TADA2BQ86TJ2 420 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 RFX6Q8HWS3 928 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 NPLOC4Q8TAT6 608 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 SNTG2Q9NY99 539 aa12.51□□□□□ -0.41
SRRT-213ENST00000611405 NRCAMQ92823 1304 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 A6NJR5 290 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 C2CD4BA6NLJ0 364 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 NOTUMQ6P988 496 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 LRRC52Q8N7C0 313 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 FAM49AQ9H0Q0 323 aaPredicted RBP12.5□□□□□ -0.41
SRRT-213ENST00000611405 APOC4-APOC2K7ER74 178 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 ALOX15BO15296 676 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 DYNC1LI2O43237 492 aaPredicted RBP12.5□□□□□ -0.41
SRRT-213ENST00000611405 IFNB1P01574 187 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 APOC2P02655 101 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 PFKMP08237 780 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 SMIM10L2AP0DMW4 78 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 SMIM10L2BP0DMW5 78 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 SNX16P57768 344 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 IFT88Q13099 833 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 ZBTB6Q15916 424 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 FAM183BPQ6ZVS7 135 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 CENPUQ71F23 418 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 RXFP2Q8WXD0 754 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 HSPH1Q92598 858 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
SRRT-213ENST00000611405 PHACTR1Q9C0D0 580 aa12.5□□□□□ -0.41
SRRT-213ENST00000611405 ACTL7BQ9Y614 415 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms