RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 PMS2CLQ68D20 193 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 LPCAT2Q7L5N7 544 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
HDDC2-210ENST00000609574 PIGKQ92643 395 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 TPSD1Q9BZJ3 242 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 ZMIZ1Q9ULJ6 1067 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 PCDHB13Q9Y5F0 798 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 SNX9Q9Y5X1 595 aa16.95■□□□□ 0.3
HDDC2-210ENST00000609574 SPAG17Q6Q759 2223 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 C1QTNF9BB2RNN3 333 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 TISP43B9A030 160 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 C1QTNF9P0C862 333 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 GAP43P17677 238 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 GRIK1P39086 918 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 PPP3CCP48454 512 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 MRPS21P82921 87 aaKnown RBP16.94■□□□□ 0.3
HDDC2-210ENST00000609574 USP4Q13107 963 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 NAIF1Q69YI7 327 aaPredicted RBP16.94■□□□□ 0.3
HDDC2-210ENST00000609574 ADGRF2Q8IZF7 708 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 TOP6BLQ8N6T0 577 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 STKLD1Q8NE28 680 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 USP33Q8TEY7 942 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 CNOT6LQ96LI5 555 aaKnown RBP16.94■□□□□ 0.3
HDDC2-210ENST00000609574 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 LINC00597Q9H2U6 94 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 POLMQ9NP87 494 aaPredicted RBP16.94■□□□□ 0.3
HDDC2-210ENST00000609574 RBAKQ9NYW8 714 aaPredicted RBP16.94■□□□□ 0.3
HDDC2-210ENST00000609574 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
HDDC2-210ENST00000609574 L1RE1Q9UN81 338 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 ARHGAP26Q9UNA1 814 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 MYH11P35749 1972 aa16.94■□□□□ 0.3
HDDC2-210ENST00000609574 GIPC1O14908 333 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 ZBTB24O43167 697 aaPredicted RBP16.93■□□□□ 0.3
HDDC2-210ENST00000609574 TMEM191BP0C7N4 346 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 TCF3P15923 654 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 GJB2P29033 226 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 MAGEA11P43364 429 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 ATXN3P54252 364 aaPredicted RBP16.93■□□□□ 0.3
HDDC2-210ENST00000609574 VSTM1Q6UX27 236 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 CRELD2Q6UXH1 353 aaPredicted RBP16.93■□□□□ 0.3
HDDC2-210ENST00000609574 DPH6Q7L8W6 267 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 DYMQ7RTS9 669 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 PGBD3Q8N328 593 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 CCDC33Q8N5R6 958 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 KDF1Q8NAX2 398 aaPredicted RBP16.93■□□□□ 0.3
HDDC2-210ENST00000609574 RIN3Q8TB24 985 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 ANKRD36BP1Q96IX9 119 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 FIZ1Q96SL8 496 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 ADAM33Q9BZ11 813 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 GDAP2Q9NXN4 497 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 MMP17Q9ULZ9 603 aa16.93■□□□□ 0.3
HDDC2-210ENST00000609574 CFAP47Q6ZTR5 3102 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 GCNT3O95395 438 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 ABL1P00519 1130 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 APODP05090 189 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 ADSSP30520 456 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 TXLNAP40222 546 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 IRX4P78413 519 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 HSF5Q4G112 596 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-210ENST00000609574 PREPLQ4J6C6 727 aaPredicted RBP16.92■□□□□ 0.3
HDDC2-210ENST00000609574 EOGTQ5NDL2 527 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 L1TD1Q5T7N2 865 aaKnown RBP16.92■□□□□ 0.3
HDDC2-210ENST00000609574 NUDT18Q6ZVK8 323 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 RASSF3Q86WH2 238 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 SFR1Q86XK3 245 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 BRSK2Q8IWQ3 736 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 KIAA1958Q8N8K9 716 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 C1orf127Q8N9H9 656 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 WHAMMQ8TF30 809 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 SLC22A12Q96S37 553 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 GCNT4Q9P109 453 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 RALYQ9UKM9 306 aaKnown RBP16.92■□□□□ 0.3
HDDC2-210ENST00000609574 SMC3Q9UQE7 1217 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 FAM208BQ5VWN6 2430 aa16.92■□□□□ 0.3
HDDC2-210ENST00000609574 C2orf78A6NCI8 922 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 K7EQS6 105 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 LEFTY2O00292 366 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 TADA3O75528 432 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 TNNC2P02585 160 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 GARTP22102 1010 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 CYP27A1Q02318 531 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 ALCAMQ13740 583 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 RABEP1Q15276 862 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 SURF1Q15526 300 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 CRY1Q16526 586 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 TRIM61Q5EBN2 209 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 RRAGBQ5VZM2 374 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
HDDC2-210ENST00000609574 DENND5BQ6ZUT9 1274 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 HDDC3Q8N4P3 179 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 SAAL1Q96ER3 474 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 PNKPQ96T60 521 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 STK17AQ9UEE5 414 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 EVLQ9UI08 416 aaPredicted RBP16.91■□□□□ 0.3
HDDC2-210ENST00000609574 CDH9Q9ULB4 789 aa16.91■□□□□ 0.3
HDDC2-210ENST00000609574 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms