RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 GCKP35557 465 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 THPOP40225 353 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 BPIFB4P59827 614 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 RNASELQ05823 741 aaKnown RBP10.34□□□□□ -0.75
CTCFL-222ENST00000609232 MCL1Q07820 350 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 SNCBQ16143 134 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 LIN9Q5TKA1 542 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 TMCO2Q7Z6W1 182 aaPredicted RBP10.34□□□□□ -0.75
CTCFL-222ENST00000609232 WDR49Q8IV35 697 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 USP33Q8TEY7 942 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 RFFLQ8WZ73 363 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 EMID1Q96A84 441 aaPredicted RBP10.34□□□□□ -0.75
CTCFL-222ENST00000609232 ACAP3Q96P50 834 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 DDX23Q9BUQ8 820 aaKnown RBP10.34□□□□□ -0.75
CTCFL-222ENST00000609232 METTL5Q9NRN9 209 aaKnown RBP10.34□□□□□ -0.75
CTCFL-222ENST00000609232 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 TNFSF13BQ9Y275 285 aa10.34□□□□□ -0.75
CTCFL-222ENST00000609232 R3HDM2Q9Y2K5 976 aaKnown RBP10.34□□□□□ -0.75
CTCFL-222ENST00000609232 CLTAP09496 248 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 ZNF865P0CJ78 1059 aaPredicted RBP10.33□□□□□ -0.76
CTCFL-222ENST00000609232 CCDC130P13994 396 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 GCNT1Q02742 428 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 NPNTQ6UXI9 565 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 FAM131BQ86XD5 332 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 SYCE1Q8N0S2 351 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 CCDC63Q8NA47 563 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 SEMA4AQ9H3S1 761 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 CPSF3Q9UKF6 684 aaKnown RBP10.33□□□□□ -0.76
CTCFL-222ENST00000609232 GABRQQ9UN88 632 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 NRCAMQ92823 1304 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 A6NJR5 290 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 RTN2O75298 545 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 ENDOD1O94919 500 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 CDR2Q01850 454 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 KRT81Q14533 505 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 AP1ARQ63HQ0 302 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 DEPDC1BQ8WUY9 529 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 HPDLQ96IR7 371 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 FAM81BQ96LP2 452 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 RHOBTB2Q9BYZ6 727 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 CNTNAP2Q9UHC6 1331 aa10.33□□□□□ -0.76
CTCFL-222ENST00000609232 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TMEM253P0C7T8 217 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TBXAS1P24557 533 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 AP3M2P53677 418 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PAK2Q13177 524 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 SGSM1Q2NKQ1 1148 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 DEFB128Q7Z7B8 93 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 HOOK3Q86VS8 718 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 SRRM1Q8IYB3 904 aaKnown RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TMEM174Q8WUU8 243 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TFAP2BQ92481 460 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 FMO2Q99518 471 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TRIM56Q9BRZ2 755 aaKnown RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PCDHB2Q9Y5E7 798 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 ADGRA2Q96PE1 1338 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 ENO4A6NNW6 628 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TSPAN3O60637 253 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 B3GAT3O94766 335 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 CD48P09326 243 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 EPHB4P54760 987 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 CRADDP78560 199 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 FMO1Q01740 532 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PRKCZQ05513 592 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 ADCY2Q08462 1091 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 GPS1Q13098 491 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 SLC29A2Q14542 456 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 DENND1BQ6P3S1 775 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 ARL10Q8N8L6 244 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PNPLA1Q8N8W4 532 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 CCDC89Q8N998 374 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PPP1R36Q96LQ0 422 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TWNKQ96RR1 684 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 GAD1Q99259 594 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 DHX35Q9H5Z1 703 aaKnown RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 RNF14Q9UBS8 474 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 COL1A2P08123 1366 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 BRWD1Q9NSI6 2320 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 VPS13AQ96RL7 3174 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 C17orf102A2RUQ5 167 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 M0QZ92 97 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PMM2O15305 246 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 SHBGP04278 402 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 MYZAPP0CAP1 466 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 MYBL1P10243 752 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 RFC1P35251 1148 aaPredicted RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TAS2R40P59535 323 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 DEFB115Q30KQ5 88 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 C4orf33Q8N1A6 199 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 EPS8L3Q8TE67 593 aaKnown RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 CLEC4CQ8WTT0 213 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 MIEF2Q96C03 454 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PIWIL1Q96J94 861 aaKnown RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 CFAP57Q96MR6 1250 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 PDZD7Q9H5P4 517 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 TUBGCP4Q9UGJ1 667 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 GNEQ9Y223 722 aaKnown RBP10.32□□□□□ -0.76
CTCFL-222ENST00000609232 WDR81Q562E7 1941 aa10.32□□□□□ -0.76
CTCFL-222ENST00000609232 F8W810 466 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms