RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 EXD1Q8NHP7 514 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.682e-6■□□□□ 11
CTCFL-216ENST00000608263 CENPTQ96BT3 561 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 RANBP17Q9H2T7 1088 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 LRRC19Q9H756 370 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 APOBEC2Q9Y235 224 aaKnown RBP10.83□□□□□ -0.68
CTCFL-216ENST00000608263 ZNF541Q9H0D2 1346 aa10.83□□□□□ -0.68
CTCFL-216ENST00000608263 DNALI1O14645 258 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 CYP1A2P05177 515 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ARL4AP40617 200 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ELK3P41970 407 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ASPHQ12797 758 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 CCDC60Q8IWA6 550 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PPIL6Q8IXY8 311 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 TTC8Q8TAM2 541 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ZNF75CPQ92670 426 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 MIEF2Q96C03 454 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 CEP41Q9BYV8 373 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PXMP2Q9NR77 195 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 FNDC3AQ9Y2H6 1198 aaKnown RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 C4AP0C0L4 1744 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 C4BP0C0L5 1744 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 FSCN2O14926 492 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PSTPIP1O43586 416 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PDGFRBP09619 1106 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 LCP1P13796 627 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 TCF7P36402 384 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 CLCN3P51790 818 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 AP1B1Q10567 949 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PTK6Q13882 451 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 CRYMQ14894 314 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PRPF31Q8WWY3 499 aaKnown RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 BSNDQ8WZ55 320 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 FAM167AQ96KS9 214 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 TBC1D10AQ9BXI6 508 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 NIF3L1Q9GZT8 377 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 SLC4A7Q9Y6M7 1214 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 hCG_2014768A0A024R1R8 64 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 XPOTO43592 962 aaKnown RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ATP9BO43861 1147 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 HSPA4LO95757 839 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PTPRAP18433 802 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 KCNA3P22001 575 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 TYK2P29597 1187 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 BIRC2Q13490 618 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 MAMLD1Q13495 774 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 GJC2Q5T442 439 aaPredicted RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 FOXR2Q6PJQ5 311 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ANO5Q75V66 913 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 KDELC2Q7Z4H8 507 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 PRPF39Q86UA1 669 aaKnown RBP10.82□□□□□ -0.68
CTCFL-216ENST00000608263 NETO2Q8NC67 525 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 TRAPPC12Q8WVT3 735 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 NSL1Q96IY1 281 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 NDE1Q9NXR1 346 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 ANGPTL2Q9UKU9 493 aa10.82□□□□□ -0.68
CTCFL-216ENST00000608263 UMODL1Q5DID0 1318 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 CFHP08603 1231 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 GNAT1P11488 350 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 NRLP54845 237 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 GTF2BQ00403 316 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 MTFR1Q15390 333 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 ZBTB41Q5SVQ8 909 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SIAH1Q8IUQ4 282 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 MAP4K3Q8IVH8 894 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TRIM42Q8IWZ5 723 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 GSDMBQ8TAX9 411 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 PLEKHO2Q8TD55 490 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 MTBPQ96DY7 904 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TMEM120AQ9BXJ8 343 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 FBXO6Q9NRD1 293 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SNX9Q9Y5X1 595 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 CICQ96RK0 1608 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 ITGB3P05106 788 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 NUMBP49757 651 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SLC12A2P55011 1212 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 COG7P83436 770 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 LY6KQ17RY6 165 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SGSM1Q2NKQ1 1148 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 TDRD10Q5VZ19 366 aaKnown RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 IL31Q6EBC2 164 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 NPNTQ6UXI9 565 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 DONSONQ9NYP3 566 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 GGA2Q9UJY4 613 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 CYP2C9P11712 490 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 DSG3P32926 999 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 RFC1P35251 1148 aaPredicted RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 SERPINB4P48594 390 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 PEX5P50542 639 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 VCPP55072 806 aaKnown RBP10.81□□□□□ -0.68
CTCFL-216ENST00000608263 FAAP100Q0VG06 881 aa10.81□□□□□ -0.68
CTCFL-216ENST00000608263 NME3Q13232 169 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms