RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 UGT2A3Q6UWM9 527 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 FBXO11Q86XK2 927 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 TRIM42Q8IWZ5 723 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 OGFOD1Q8N543 542 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 POU5F2Q8N7G0 328 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 POMGNT1Q8WZA1 660 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 PRICKLE1Q96MT3 831 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 GRIP2Q9C0E4 1043 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 IQCGQ9H095 443 aaKnown RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 DDX39AO00148 427 aaKnown RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 PSMD10O75832 226 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 FOSP01100 380 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 C6orf222P0C671 652 aaPredicted RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 ADARP55265 1226 aaKnown RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 MYBPC2Q14324 1141 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
CDCA3-212ENST00000604599 ANKRD20A4Q4UJ75 823 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 TMEM259Q4ZIN3 620 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 MAP7D3Q8IWC1 876 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 CATSPER2Q96P56 530 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 SLITRK1Q96PX8 696 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 ACCSQ96QU6 501 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 SHCBP1LQ9BZQ2 653 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 WWP1Q9H0M0 922 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 TMEM206Q9H813 350 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 RAB20Q9NX57 234 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 CIDEBQ9UHD4 219 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 SOX13Q9UN79 622 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 POLIQ9UNA4 740 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 IKBKGQ9Y6K9 419 aa13.01□□□□□ -0.33
CDCA3-212ENST00000604599 TLR3O15455 904 aaKnown RBP13□□□□□ -0.33
CDCA3-212ENST00000604599 DSG3P32926 999 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 PRELPP51888 382 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 VCPP55072 806 aaKnown RBP13□□□□□ -0.33
CDCA3-212ENST00000604599 DYNLT1P63172 113 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 ZNF200P98182 395 aaPredicted RBP13□□□□□ -0.33
CDCA3-212ENST00000604599 FOLH1Q04609 750 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 NADK2Q4G0N4 442 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 FAM182AQ5T1J6 154 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CES4AQ5XG92 561 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 METTL25Q8N6Q8 603 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 EBF4Q9BQW3 602 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CCDC106Q9BWC9 280 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CYP4F11Q9HBI6 524 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CNTN3Q9P232 1028 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 NFASCO94856 1347 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 MYOCOSA0A1B0GUC4 107 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 TCRBV7S3A2A0A539 114 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CAPN8A6NHC0 703 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CLPTM1O96005 669 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 TFAP2AP05549 437 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CDK4P11802 303 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 GDF10P55107 478 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 BTKQ06187 659 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 OASLQ15646 514 aaKnown RBP13□□□□□ -0.33
CDCA3-212ENST00000604599 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 AAGABQ6PD74 315 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 C1orf228Q6PIY5 440 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 PADI6Q6TGC4 694 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 KYAT3Q6YP21 454 aaKnown RBP13□□□□□ -0.33
CDCA3-212ENST00000604599 MON1BQ7L1V2 547 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 ADGRG6Q86SQ4 1221 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 FBXL13Q8NEE6 735 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CPT1BQ92523 772 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 SRPK1Q96SB4 655 aaKnown RBP13□□□□□ -0.33
CDCA3-212ENST00000604599 NYXQ9GZU5 481 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 NDUFA13Q9P0J0 144 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 PCDHGB4Q9UN71 923 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 ZNF232Q9UNY5 417 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 PCDHGB5Q9Y5G0 923 aa13□□□□□ -0.33
CDCA3-212ENST00000604599 CYB561D2O14569 222 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 UFL1O94874 794 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 PIM1P11309 404 aaPredicted RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 CPOXP36551 454 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 SFSWAPQ12872 951 aaKnown RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 MAMLD1Q13495 774 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 ITGA9Q13797 1035 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 CCNIQ14094 377 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 KBTBD12Q3ZCT8 623 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 PAOXQ6QHF9 649 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 EPB41L1Q9H4G0 881 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 PCDH9Q9HC56 1237 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 PKD2L1Q9P0L9 805 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 GAKO14976 1311 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 IQANK1A0A1B0GTG1 560 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 COPEO14579 308 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 FAM155BO75949 473 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 INHBAP08476 426 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 RAG1P15918 1043 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 PCSK6P29122 969 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 GTF2H1P32780 548 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 RPL5P46777 297 aaKnown RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TBL3Q12788 808 aaKnown RBP12.99□□□□□ -0.33
CDCA3-212ENST00000604599 TLR1Q15399 786 aa12.99□□□□□ -0.33
CDCA3-212ENST00000604599 CHI3L2Q15782 390 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms