RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 GABBR2O75899 941 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 TJP3O95049 919 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 F2P00734 622 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 KRT7P08729 469 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 IQCF3P0C7M6 154 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 VDRP11473 427 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 ITGB8P26012 769 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 SSR1P43307 286 aaKnown RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 IRAK1P51617 712 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 RAD23BP54727 409 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 ZNF252P-AS1Q0IIN9 211 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 NFX1Q12986 1120 aaKnown RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 PPIGQ13427 754 aaKnown RBP eCLIP10.49□□□□□ -0.733e-12■□□□□ 10.1
VPS25-202ENST00000589219 ACAP1Q15027 740 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 HADHQ16836 314 aaKnown RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 SLC10A6Q3KNW5 377 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 WDR72Q3MJ13 1102 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 PTPN20Q4JDL3 420 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 ZNF394Q53GI3 561 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 C2CD6Q53TS8 623 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 KCTD16Q68DU8 428 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 MFSD5Q6N075 450 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 DENND1BQ6P3S1 775 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 RHBDF2Q6PJF5 856 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 ZNF365Q70YC5 407 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 PHLDB2Q86SQ0 1253 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 TLK2Q86UE8 772 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 CDR2LQ86X02 465 aaPredicted RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 TMEM192Q8IY95 271 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 CXorf38Q8TB03 319 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 C1orf54Q8WWF1 131 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 TFAP2BQ92481 460 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 ZBTB10Q96DT7 871 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 TMEM176AQ96HP8 235 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 CCDC114Q96M63 670 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 FAM161BQ96MY7 647 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 TSPAN18Q96SJ8 248 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 GCOM2Q9BZD3 368 aaPredicted RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 SDCBP2Q9H190 292 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 SMYD3Q9H7B4 428 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 CNOT10Q9H9A5 744 aaKnown RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 CHST7Q9NS84 486 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 TBX21Q9UL17 535 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 BARX2Q9UMQ3 279 aaPredicted RBP10.49□□□□□ -0.73
VPS25-202ENST00000589219 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS25-202ENST00000589219 EFR3BQ9Y2G0 817 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 Q9Y3F1 56 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 NRCAMQ92823 1304 aa10.49□□□□□ -0.73
VPS25-202ENST00000589219 SMIM35A0A1B0GVV1 85 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SIGLEC16A6NMB1 481 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 M0QYV0 167 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 ADCY6O43306 1168 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 MICAL2O94851 1124 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SETSIPP0DME0 302 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 PSMA2P25787 234 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 AXLP30530 894 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SSTR3P32745 418 aaPredicted RBP10.48□□□□□ -0.73
VPS25-202ENST00000589219 GJC1P36383 396 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 RAP1GAPP47736 663 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 GABRB2P47870 512 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 KCNJ1P48048 391 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 HNRNPH2P55795 449 aaKnown RBP10.48□□□□□ -0.73
VPS25-202ENST00000589219 RPL7AP62424 266 aaKnown RBP10.48□□□□□ -0.73
VPS25-202ENST00000589219 PPP2R2AP63151 447 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 MYO1EQ12965 1108 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 ZNF268Q14587 947 aaPredicted RBP10.48□□□□□ -0.73
VPS25-202ENST00000589219 CNGA2Q16280 664 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 FSCN1Q16658 493 aaKnown RBP10.48□□□□□ -0.73
VPS25-202ENST00000589219 MARCH8Q5T0T0 291 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SLC27A1Q6PCB7 646 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SPOCD1Q6ZMY3 1216 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 KIAA0319LQ8IZA0 1049 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 TMEM199Q8N511 208 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 LRRC52Q8N7C0 313 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SLC4A11Q8NBS3 891 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 OR2W6PQ8NHA6 318 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 TLCD1Q96CP7 247 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 KIF12Q96FN5 646 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 PGM2Q96G03 612 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 HPDLQ96IR7 371 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SNX27Q96L92 541 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 GUCD1Q96NT3 240 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 TRAIPQ9BWF2 469 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 ELOVL4Q9GZR5 314 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 DNAI2Q9GZS0 605 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 EPB41L4BQ9H329 900 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 SYNCQ9H7C4 482 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 DPP3Q9NY33 737 aa10.48□□□□□ -0.73
VPS25-202ENST00000589219 GNEQ9Y223 722 aaKnown RBP10.48□□□□□ -0.73
VPS25-202ENST00000589219 hCG_1818297A0A087WSY0 165 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 MBLAC1A4D2B0 266 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 A6NJR5 290 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 O00370 1275 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 MEFVO15553 781 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 DYNC1LI2O43237 492 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 RIPK2O43353 540 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms