RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 GRIK1P39086 918 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 MAGEA11P43364 429 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 MAP3K7CLP57077 242 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 ARID5AQ03989 594 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 PTK2Q05397 1052 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CNGA2Q16280 664 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 GOLGA7BQ2TAP0 167 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 PPM1LQ5SGD2 360 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 RARS2Q5T160 578 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 LIN9Q5TKA1 542 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 LCLAT1Q6UWP7 414 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CLEC20AQ6ZU45 233 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CCDC149Q6ZUS6 474 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 TTC30AQ86WT1 665 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 SCN4BQ8IWT1 228 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 MAFAQ8NHW3 353 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 UBA3Q8TBC4 463 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 GIPC2Q8TF65 315 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 SMARCD1Q96GM5 515 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 DNAI2Q9GZS0 605 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 CDH22Q9UJ99 828 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.35□□□□□ -0.592e-11■□□□□ 10.8
SMARCA4-213ENST00000587988 DOCK6Q96HP0 2047 aa11.35□□□□□ -0.59
SMARCA4-213ENST00000587988 REV3LO60673 3130 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 F8VP50 259 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 TULP2O00295 520 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 LRG1P02750 347 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 FAM200BP0CF97 657 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 ALDH1A3P47895 512 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 TUFMP49411 452 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 ZBED6P86452 979 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 TBX2Q13207 712 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 MTMR3Q13615 1198 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 PKDCCQ504Y2 493 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 TAF3Q5VWG9 929 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 SMYD5Q6GMV2 418 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 VSTM1Q6UX27 236 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 TMC5Q6UXY8 1006 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 IRF2BP2Q7Z5L9 587 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 NOP9Q86U38 636 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 ANKRD52Q8NB46 1076 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 SLC20A1Q8WUM9 679 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 DDX1Q92499 740 aaKnown RBP11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 ZNF707Q96C28 371 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 C8orf48Q96LL4 319 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 DUSP16Q9BY84 665 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 S1PR5Q9H228 398 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 SFXN1Q9H9B4 322 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 CSNK1G1Q9HCP0 422 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 PRDM6Q9NQX0 595 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 DZANK1Q9NVP4 752 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 HCFC1R1Q9NWW0 138 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 ZDHHC7Q9NXF8 308 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 DPP7Q9UHL4 492 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 MYO6Q9UM54 1294 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 ATP8B3O60423 1300 aa11.34□□□□□ -0.59
SMARCA4-213ENST00000587988 HHLA1C9JL84 531 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 H3BQ06 376 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 M0QYV0 167 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 TRIM66O15016 1216 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 PAPLNO95428 1278 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 MMEP08473 750 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 HNRNPA1P09651 372 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 SRGAP2BP0DMP2 458 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 NPR3P17342 541 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 CHRNB2P17787 502 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 HOXA9P31269 272 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 KRT9P35527 623 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 ADKP55263 362 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 BPIFB4P59827 614 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 PDE4CQ08493 712 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 STILQ15468 1287 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 CLUL1Q15846 466 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 SFMBT2Q5VUG0 894 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 RTL10Q7L3V2 364 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 GPRIN1Q7Z2K8 1008 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 CMASQ8NFW8 434 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 EPS8L1Q8TE68 723 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 SECISBP2LQ93073 1101 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 IQCDQ96DY2 449 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 PRKD2Q9BZL6 878 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 DMAP1Q9NPF5 467 aaPredicted RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 DNMT3BQ9UBC3 853 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 NOCTQ9UK39 431 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 PCDHGC3Q9UN70 934 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 LUC7L2Q9Y383 392 aaKnown RBP11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 C2orf16Q68DN1 1984 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 GREB1Q4ZG55 1949 aa11.33□□□□□ -0.6
SMARCA4-213ENST00000587988 NOTCH4Q99466 2003 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 FAM170AA1A519 330 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC38A8A6NNN8 435 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 TNFRSF10BO14763 440 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms